Investigators have identified genomic alterations that appear to be associated with prognosis in men with metastatic castration-sensitive prostate cancer (mCSPC).
Astudy of 424 patients with mCSPC treated at a tertiary care center revealedthat alterations in the androgen receptor (AR), TP53, cell-cycle, MYC oncogenicsignaling pathways occur more commonly in tumors with worse overall survivaland decreased time to castration-resistant disease, whereas alterations in theSPOP and MNT pathways occur more frequently in tumors with a better prognosis,according to findings published in ClinicalCancer Research.
Thegenomics of metastatic castration-sensitive prostate cancer have not been wellcharacterized in the literature, but it is now clear that upfront treatmentintensification with taxanes or next-generation AR-directed therapies offerbenefit in the overall patient population, said the studys co-senior authorWassim Abida, MD, a medical oncologist at Memorial Sloan Kettering CancerCenter in New York. The question remains whether treatment selection ortargeted therapies can be employed based on genomic characteristics.
Theassociation between alterations in cell-cycle genes and TP53 and MYC pathwaygenes and worse outcomes may pave the way for targeted therapy in thesehigher-risk groups, Dr Abida said.
Thestudy compared genomic alterations according to clinical phenotypes: high- vslow-volume disease and de novo vsmetastatic recurrence. Of the 424 patients in the study, 213 men (50%) hadhigh-volume disease (4 or more bone metastases or visceral metastases) and 211(50%) had low-volume disease; 65% had de novometastases and 35% had metastatic recurrence. At the time of sample collection, patients had a medianage of 66 years. The investigators conducted gene sequencing from May 2015 to September2018.
High- vs low-volume disease
Inadjusted analyses, men with higher-volume disease had significant 1.8- and3.7-fold increased risks of castration-resistant disease and death,respectively, compared with men who had low-volume disease. Tumor specimensfrom men with high-volume disease had more copy number alterations.
Amongmen with high-volume disease, the highest-ranking pathways were the NOTCH,cell-cycle, and epigenetic modifiers pathways.
Althoughthe prevalence of CDK12 alterations differed between patients with de novo metastatic and those with metastaticrecurrences, the groups had similar prognoses. I was actually surprised therewere not more dramatic genomic differences between de novo and relapsed disease, said study co-senior author PhilipKantoff, MD, a medical oncologist and Chair of the Department of Medicine atMemorial Sloan Kettering Cancer Center in New York.
Afteradjusting for disease volume and other genomic pathways, the researchers foundthat the rates of castration resistance differed by 1.5-fold and up to 5-fold accordingto alterations in the AR, SPOP (inverse), TP53, cell-cycle, WNT (inverse), andMYC pathways. Overall survival (OS) rates varied from 2- to 4-fold according toalterations in the AR, SPOP (inverse), WNT (inverse), and cell-cycle pathways.PI3K pathway alterations were not associated with prognosis.
Docetaxeland next-generation AR axis-directed therapies have been shown to prolong OS, butit remains uncertain which patients benefit the most from intensifiedtherapies. We did not find any obvious genomic reason to explain thedifferences in docetaxel sensitivity between high- and low-volume disease, DrKantoff said.
Theauthors pointed out that genomic landscape studies of tumor DNA profiling inprostate cancer in general have excluded metastatic castration-sensitive tumors.Instead, most studies have focus on localized disease or metastaticcastration-resistant disease.
DrAbida and his colleagues acknowledged that their study has inherent biases becauseit was hospital based and enrolled patients at an academic referral center.
Moleculardeterminants of castration resistance or survival in patients with mHSPC have beenunclear, but the new study sheds new light on molecular alterations associatedwith poor outcomes in men with mHSPC, particularly alterations in the AR, cellcycle genes, MYC, and TP53 genes, said Joshi Alumkal, MD, the Leader of theProstate/Genitourinary Medical Oncology Section and Associate Division Chieffor Basic Research in the Hematology-Oncology Division at the University ofMichigan School of Medicine.
Severalrandomized phase 3 clinical trials now show a benefit of escalating treatmentin men with mHSPC by adding novel AR-targeting agents or chemotherapy plusmedical castration versus medical castration alone, Dr Alumkal said. Whetherthe addition of any of these specific agents to medical castration isassociated with improved outcomes in patients with poor-risk molecularalterations identified by the new study is a critical next question, he said.
Urologiconcologist James Mohler, MD, Senior Vice President for Translational Researchat Roswell Park Comprehensive Cancer Center in Buffalo, New York, said the new study found relativelysmall differences among the clinical phenotypes, but that is not surprisingbecause the temporal differences in the evolution of tumor biology occur overlong periods of time, much of which precedes clinical presentation. The hazardratios for association between mutational analysis and oncologic outcome insome cases were statistically significant, but are so small as to not beclinically significant. Part of the reason for this may be that prostatecancer, once metastatic, is so complex that no single mutation or single genepathway is driving growth and hence targetable at a high rate beyond the long provenbenefit from androgen deprivation therapy, Dr Mohler said.
Theresults reported by these authors may be disappointing to many clinicians, butare important because they represent a comprehensive analysis of mCSPC. Theauthors appropriately acknowledge that better tumor sampling and morecomprehensive genetic analysis and larger numbers of patients may be requiredto find any benefit to genomic or somatic sequencing, Dr Mohler said. I amafraid that these limitations are not just of their work but a biologicallimitation of aggressive prostate cancer, which makes improving treatment ofadvanced prostate cancer in an individual patient extremely challenging.
Reference
Stopsack KH, Nandakumar S, Wibmer AG, et al. Oncogenic genomic alterations, clinical phenotypes, and outcomes in metastatic castration-sensitive prostate cancer [published online March 27, 2020]. Clin Cancer Res. doi: 10.1158/1078-0432.CCR-20-0168
See the rest here:
Genomic Alterations Linked to Outcomes in mCSPC - Renal and Urology News
- ENCODE: Encyclopedia Of DNA Elements - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 07.05.2010 - The Human Genome [ Coast To Coast AM ] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- NOVA scienceNOW : 51 - Public Genomes, Algae Fuel, Mystery of the Gakkel Ridge, Yoky Matsuoka - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Vincent T. - Genome (Club Remix) - [Preview] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Comparing The Human And Chimpanzee Genomes - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Whole Genome Sequencing and Its Impact on Clinical Care - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Carlos Bustamante -- "Reconstructing the Great Human Diasporas from Genome Variation Data" - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 3 Sad Surprises: The Human Genome Project - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The RFW interviews Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Science Bulletins: Scientists Peer Inside "Superbug" Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome : Live @ Smu's : June 3 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Inoki Genome Federation - Genome 19 - 04 02 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- THE HUMAN GENOME MUSIC PROJECT - CHROMOSOME 1 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genomic Medicine - Bruce Korf (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Human Genome's 'Blockbuster' Potential Undervalued in Bid GSK vs HGSI - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Announcing the Completion of the First Survey of the Entire Human Genome at the White House - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- DNA analysis Part I. Genomic Sequencing - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The Genome Question: Moore vs. Jevons with Bud Mishra - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome-Wide Association Studies - Karen Mohlke (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- New human genome research aids understanding of disease [Last Updated On: September 8th, 2012] [Originally Added On: September 8th, 2012]
- UNC Lineberger scientists lead definition of key lung cancer genome [Last Updated On: September 10th, 2012] [Originally Added On: September 10th, 2012]
- Illumina Announces Expedited Individual Genome Sequencing Service (IGS) [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Genome research given a boost with opening of bioscience facility [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Re-Imagining Our Genes: ENCODE Project Reveals Genome as an Information Processing System [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Illumina unveils upgraded genome sequence service [Last Updated On: September 12th, 2012] [Originally Added On: September 12th, 2012]
- US Personalized Cancer Genome Sequencing Market [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Yale maps “uncharted” genome regions [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Research and Markets: US Personalized Cancer Genome Sequencing Market [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- 3Qs: New clues to unlocking the genome [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- Oyster Genome Pries Open Mollusk Evolutionary Shell [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Bangladeshi scientist decodes genome of deadly fungus [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome uncover the stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- The oyster genome reveals stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Diseases of aging map to a few 'hotspots' on the human genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- GnuBIO Awarded $4.5 Million in Funding from the National Human Genome Research Institute to Develop Lower Cost Genome ... [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome mystery unravelled [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Devangshu Datta: What's in a genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Pacific Oyster Genome Shows Stress Adaptation And Complexity Of Shell Formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- UNC Lineberger scientists lead cancer genome analysis of breast cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Encoding the human genome [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Cancer genome analysis of breast cancer: Team identifies genetic causes and similarity to ovarian cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Fungus genome map paves way for 'Snow White' jute variety [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- New online, open access journal focuses on microbial genome announcements [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- By Simply Sharing, Doctors Could Unlock the Genome's Potential [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- Forget the Cloud—Knome Offers Genome Analysis in a Box [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- BGI@CHOP Joint Genome Center to Offer Clinical Next-Generation Sequencing Services [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- Holy Bat Virus! Genome Hints At Origin Of SARS-Like Virus [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- Community Fundraising Effort Helps Researchers Sequence Parrot Genome [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- UMass Med professors are sleuths of the genome [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- Knome Introduces the knoSYS™100; First Plug-and-Play Human Genome Interpretation System [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- First large scale trial of whole-genome cancer testing for clinical decision-making reported [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Should You Get Your Genome Mapped? [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Surprising differences between apples and pears [Last Updated On: October 2nd, 2012] [Originally Added On: October 2nd, 2012]
- 50-Hour Whole Genome Sequencing Provides Rapid Diagnosis for Children With Genetic Disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- A map of rice genome variation reveals the origin of cultivated rice [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome analysis promises hope for breast cancer patients [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome Alberta Welcomes Alberta Minister of Enterprise and Advanced Education, Stephen Khan and Federal Minister of ... [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Fifty-hour whole genome sequencing provides rapid diagnosis for children with genetic disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Will Low-Cost Genome Sequencing Open 'Pandora's Box'? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome testing could help individualize treatments [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Would you get your genome tested? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- The Genome — a Pandora's Box? [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- Fast genome test could help sick newborns [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- In-Depth Genome Analysis Moves Toward The Hospital Bed [Last Updated On: October 5th, 2012] [Originally Added On: October 5th, 2012]
- Your Verdict On Getting A Genome Test? Bring It On [Last Updated On: October 6th, 2012] [Originally Added On: October 6th, 2012]
- Genome-wide study identifies 8 new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome-wide study identifies eight new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome interpreter vies for place in clinical market [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- The $1,000 Genome: A Bait and Switch? [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- Mount Sinai School of Medicine Offers First-Ever Course with Whole Genome Sequencing [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- First whole genome sequencing of multiple pancreatic cancer patients has been outlined [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Cheap genome sequences demand new rules on privacy [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- UConn Gets Grant For Genome Research [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Inconsistent Genome Privacy Laws Need Toughening, Panel Says [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- US panel calls for stronger privacy for genome data [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- Genome Canada Board Appoints New Chair [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- The $1,000 Genome Is Almost Here- Are We Ready? [Last Updated On: October 15th, 2012] [Originally Added On: October 15th, 2012]
- Global genome effort seeks genetic roots of disease [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Massive encyclopedia helps explain how the human genome works [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Genome evolution and carbon dioxide dynamics [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]