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DNA analysis finds links between severe COVID and other conditions | Penn Today – Penn Today
Posted: May 6, 2022 at 12:33 am
A collection of human DNA variants tied to more severe cases of COVID-19 are also associated with other serious medical conditions such as those dealing with blood clots and faulty inflammatory responses, according to a new study. A summary of this analysis, which comes from stored genetic data from 600,000 people, is published in PLOS Genetics.
This work provides invaluable insights into the genetic architecture of COVID-19 risk factors and disease complications, a pressing need as the pandemic continues, says the studys lead author, Anurag Verma, an instructor in translational medicine and human genetics at the Perelman School of Medicine. The balance between the associations that we uncovered will be important as more therapies for COVID-19 are considered.
Data used in this study comes from the Million Veteran Program, which was established by the U.S. Department of Veterans Affairs. It is among the largest and most diverse biobanks (repositories of genetic information used for research) in the world, making it ideal for examining the various pieces of DNA that could be exploited by COVID-19.
With the variants associated with severe COVID-19 in hand, the researchers examined whether any other health conditions were more likely to be associated with them. To do this, they analyzed roughly 1,500 phenotypes, meaning the identifiable traits of a disease, which could be gleaned from an electronic health record.
Variants that had been associated with more severe COVID-19 in the ABO locus, a term meaning a genes position on a chromosome, were found to also be associated with the most other conditions. Patients with these variants were 33% more likely to have conditions like venous embolism and thrombosis, which both involve blood clots.
Some differences in association were seen when genetic ancestry was taken into account. The odds of someone having neutropeniaa condition in which a patient has a low count of the white blood cells used by the bodys immune systemwere 29% higher in those with African genetic ancestry who had variants in the LMNA locus. Those with European genetic ancestry who had the same variants did not share a higher association.
This story is by Frank Otto. Read more at Penn Medicine News.
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Havent had COVID yet? Its got to do with more than your T cells – WAtoday
Posted: at 12:33 am
It could be in their genes, posits Tangye. Genetic influences are either making people vulnerable to really severe disease but may also contribute to resistance there are populations of people who probably should have been infected and sick but werent.
Exactly which genes have a protective effect is part of an international research project called the COVID Human Genetic Effort, that Christodoulou is involved with.
We are collecting information and DNA from individuals who have been hyperexposed to COVID but who dont seem to contract COVID for example, living in a household where multiple family members were infected, but one member of the household wasnt to see if genetic factors can be identified that might offer protection against COVID infection, says Christodoulou, who is also the chair of Genomic Medicine at the University of Melbourne.
While researchers keep searching for the genetic clues, a new study published at the end of April, found booster shots can increase the range of immune cells, called memory B cells, making them more effective at neutralising COVID.
With any infection or vaccination, our body responds and then forgets the virus, explains Tangye, but becomes better at responding with repeated exposure. The first and second doses are like the training, getting your immune system into good shape and ready to take off and the third really gives you the protection you are primed and ready to go.
So if someone who has recently been vaccinated is exposed to COVID, they may be protected. If they have been boosted, this may provide even more protection, at least for a time.
Loading
The degree of exposure how long we were in contact with someone and whether we were inside or out will also make a difference, as will our behaviour.
People have become much more cognisant of social distancing and washing their hands and wearing masks. There are those non-pharmaceutical interventions people have embraced, Tangye says.
As for how healthy you are generally, that unfortunately wont make us resistant to catching COVID.
We regularly hear of otherwise young, fit and healthy individuals contracting very severe COVID, says Christodoulou. For those otherwise healthy people we know that there are some factors that are associated with this, e.g., having so-called auto-antibodies to type 1 interferons (type 1 interferons are the first line of defence against COVID) or having mutations in genes that are involved in production and function of type 1 interferons.
Being healthy is good. But healthy people are still getting sick. Its not a panacea.
Interestingly, Tangye adds that there are people who naturally have this type 1 interferon pathway turned up a little bit: That can be pathogenic they can get these inflammatory diseases that dont have a defined triggerthese non-infectious, spontaneous flares for no good reason but people with those conditions may well have some resistance to COVID just because they have that innate immune response primed.
These people account for only a fraction of never COVIDs. For the rest, it seems to come down to a combination of immunity, genetics, environment and luck.
Being healthy all round puts you in better shape against infectious diseases and lifestyle disease, says Tangye. Being healthy is good. But healthy people are still getting sick. Its not a panacea.
Most of us may not be able to do much to avoid the virus, but we can still look to never COVIDs for some answers.
Loading
If we can identify genetic reasons why people dont get COVID, it may help inform ways by which SARS COV2 enters or attacks our cells remember viruses are hopeless on their own. They need all the machinery of our cells to be disease-causing, explains Tangye.
So if we can disrupt the human cell processes without too many adverse events we could be better at stopping viral infection.
Make the most of your health, relationships, fitness and nutrition with our Live Well newsletter. Get it in your inbox every Monday.
Continued here:
Havent had COVID yet? Its got to do with more than your T cells - WAtoday
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Are COVID-resistant people healthier or is it in their genes? – News Azi
Posted: at 12:33 am
It could be in their genes, posits Tangye.
Genetic influences are either making people vulnerable to really severe disease but may also contribute to resistance there are populations of people who probably should have been infected and sick but werent.
Exactly which genes have a protective effect is part of an international research project called the COVID Human Genetic Effort, that Christodoulou is involved with.
We are collecting information and DNA from individuals who have been hyperexposed to COVID but who dont seem to contract COVID for example, living in a household where multiple family members were infected, but one member of the household wasnt to see if genetic factors can be identified that might offer protection against COVID infection, says Christodoulou, who is also the chair of Genomic Medicine at the University of Melbourne.
While researchers keep searching for the genetic clues, a new study published at the end of April, found booster shots can increase the range of immune cells, called memory B cells, making them more effective at neutralising COVID.
With any infection or vaccination, our body responds and then forgets the virus, explains Tangye, but becomes better at responding with repeated exposure. The first and second doses are like the training, getting your immune system into good shape and ready to take off and the third really gives you the protection you are primed and ready to go.
Loading
So if someone who has recently been vaccinated is exposed to COVID, they may be protected. If they have been boosted, this may provide even more protection, at least for a time.
The degree of exposure how long we were in contact with someone and whether we were inside or out will also make a difference, as will our behaviour.
People have become much more cognisant of social distancing and washing their hands and wearing masks. There are those non-pharmaceutical interventions people have embraced, Tangye says.
As for how healthy you are generally, that unfortunately wont make us resistant to catching COVID.
We regularly hear of otherwise young, fit and healthy individuals contracting very severe COVID, says Christodoulou. For those otherwise healthy people we know that there are some factors that are associated with this, e.g., having so-called auto-antibodies to type 1 interferons (type 1 interferons are the first line of defence against COVID) or having mutations in genes that are involved in production and function of type 1 interferons.
Being healthy is good. But healthy people are still getting sick. Its not a panacea.
Interestingly, Tangye adds that there are people who naturally have this type 1 interferon pathway turned up a little bit: That can be pathogenic they can get these inflammatory diseases that dont have a defined triggerthese non-infectious, spontaneous flares for no good reason but people with those conditions may well have some resistance to COVID just because they have that innate immune response primed.
These people account for only a fraction of never COVIDs. For the rest, it seems to come down to a combination of immunity, genetics, environment and luck.
Being healthy all round puts you in better shape against infectious diseases and lifestyle disease, says Tangye. Being healthy is good. But healthy people are still getting sick. Its not a panacea.
Most of us may not be able to do much to avoid the virus, but we can still look to never COVIDs for some answers.
Loading
If we can identify genetic reasons why people dont get COVID, it may help inform ways by which SARS COV2 enters or attacks our cells remember viruses are hopeless on their own. They need all the machinery of our cells to be disease-causing, explains Tangye. So if we can disrupt the human cell processes without too many adverse events we could be better at stopping viral infection.
Make the most of your health, relationships, fitness and nutrition with our Live Well newsletter. Get it in your inbox every Monday.
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Stem cell-derived model provides insights on gene activity and addiction – EurekAlert
Posted: at 12:33 am
image:Researchers at North Carolina State University have demonstrated that neuron-like cells derived from human stem cells can serve as a model for studying changes in the nervous system associated with addiction. The work sheds light on the effect of dopamine on gene activity in neurons, and offers a blueprint for related research moving forward. This image shows stem cell-derived medium spiny-like neuron morphology highlighted by the green fluorescent protein GFP and neuron marker MAP2 in red. view more
Credit: Ryan Tam, NC State University
Researchers at North Carolina State University have demonstrated that neuron-like cells derived from human stem cells can serve as a model for studying changes in the nervous system associated with addiction. The work sheds light on the effect of dopamine on gene activity in neurons, and offers a blueprint for related research moving forward.
It is extremely difficult to study how addiction changes the brain at a cellular level in humans nobody wants to experiment on somebodys brain, says Albert Keung, corresponding author of the study and an assistant professor of chemical and biomolecular engineering at NCState. What weve done here demonstrates that we can gain a deep understanding of those cellular responses using neuron-like cells derived from human stem cells.
At issue is how cells in our nervous system respond to drugs that are associated with substance abuse and addiction. Our bodies produce a neurotransmitter called dopamine. Its associated with feelings, such as pleasure, that are related to motivation and reward. When neuronal cells in the brains reward pathway are exposed to dopamine, the cells activate a specific suite of genes, triggering the feelings of reward that can make people feel good. Many drugs from alcohol and nicotine to opioids and cocaine cause the body to produce higher levels of dopamine.
In experiments using rodents, researchers have shown that when relevant neuronal cells are exposed to high levels of dopamine for an extended period of time, they become desensitized meaning the cells gene activation is less pronounced in response to the dopamine, Keung says. This is called gene desensitization. However, until now, it hasnt been possible to do an experimental study using human neuronal cells.
Our work here is the first experimental study to demonstrate gene desensitization in human neuronal cells, specifically in response to dopamine, says Ryan Tam, first author of the study and a Ph.D. student at NCState. We dont have to infer that it is happening in human cells; we can show that it is happening in human cells.
In their study, Tam and Keung exposed neuron-like cells derived from human stem cells to varying levels of dopamine for varying periods of time. The researchers found that when cells were exposed to high levels of dopamine for an extended period of time, the relevant reward genes became significantly less responsive.
This is an interesting finding, but its also a proof of concept study, Tam says. Weve demonstrated that gene desensitization to dopamine occurs in human cells, but there is still a lot we dont know about the nature of the relationship between dopamine and gene desensitization.
For example, could higher levels of dopamine cause desensitization at shorter time scales? Or could lower levels of dopamine cause desensitization at longer time scales? Are there threshold levels, or is there some sort of linear relationship? How might the presence of other neurotransmitters or bioactive chemicals affect these responses?
Those are good questions, which future research could address, says Keung. And weve demonstrated that these neuron-like cells derived from human stem cells are a good model for conducting that research.
The paper, Human Pluripotent Stem Cell-Derived Medium Spiny Neuron-like Cells Exhibit Gene Desensitization, is published open access in the journal Cells. The work was done with support from an NIH Avenir Award in Genetics and Epigenetics of Substance Abuse, under grant number 1DP1DA044359. The Avenir Award program represents the National Institute onDrug Abuse's commitment to supporting researchers who represent the future of addiction science.
Experimental study
Cells
Human Pluripotent Stem Cell-Derived Medium Spiny Neuron-like Cells Exhibit Gene Desensitization
21-Apr-2022
Disclaimer: AAAS and EurekAlert! are not responsible for the accuracy of news releases posted to EurekAlert! by contributing institutions or for the use of any information through the EurekAlert system.
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Stem cell-derived model provides insights on gene activity and addiction - EurekAlert
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The 12 Coolest Scientific Discoveries Of April 2022 – SlashGear
Posted: at 12:33 am
It's been a big month for Perseverance. In addition to reaching Jezero Delta and breaking distance records, (per Space), it also captured the best ever recording of a solar eclipse from the surface of the red planet.
On April 2, 2022, Mars's moon Phobos passed in front of the Sun, looking an awful lot like the slowly wandering eye of Sauron. In addition to just looking really cool, the observations can help scientists to better understand the gravitational relationship between Mars and its two moons, (per NASA).
Perseverance used its Mastcam-Z camera system which is intended to take panoramic and 3D images of the Martian environment while the rover makes its way along the surface. While NASA has captured several eclipses from the Martian surface in the past, going all the way back to Spirit and Opportunity, the Mastcam-Z provided full color, the highest zoom, and best frame rate to date.
As explained by NASA, Phobos is only about 17 miles across at its widest point and it moves pretty fast, orbiting Mars three times per day. As a result, the eclipse was relatively brief, lasting only about 40 seconds.
It's good that we're getting these images while we can. The gravitational relationship between Mars and Phobos is such that eventually, the moon will crash to the planet's surface. Luckily, that won't happen for tens of millions of years.
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Technology May Beat Biology When It Comes To Finding Alien Signatures, Scientists Argue – IFLScience
Posted: May 3, 2022 at 10:17 pm
Our intuition that life is far more widespread in the universe than technology may be misleading us. Reconsideration could affect how resources are prioritized in one of science's great quests.
The search to find life beyond the Earth has followed two broad paths seeking signs of intelligent life such as radio signals, or hunting for the effects of biological activity. Having so far not succeeded on either account, it's hard to be definitive as to which is more likely to work.
Nevertheless, a study published inThe Astrophysical Journal Letters carries the somewhat counter-intuitive case for technology over biology.
The argument for seeking biological signs is simple. Not all worlds with life will spawn civilizations whose technology we can detect, indeed it is likely the vast majority won't. A star like Alpha Centauri could easily have lifeforms on orbiting planets, the chance of something high-tech is remote. The idea is implicitly encoded in the famous Drake equation, an attempt to calculate the number of technological civilizations in the galaxy.
However, Dr Jason Wright of Penn State University and co-authors argue that this simple reasoning needs to be set against four factors which may collectively outweigh it.
The most obvious of these is the ease of detection. If a radio signal is powerful enough, we could spot it across the galaxy, whereas biological signs are likely to be noticeable only around nearby stars.
There is also the fact technological life forms may spread their products far wider than they themselves will travel. As far as we know, only Earth hosts life within our solar system, but human technology can be found on Mars and the Moon and in orbit around Venus and Jupiter. It's possible some will stay functional long after not only humanity, but all life on Earth, has gone.
The possibility technology could go on self-replicating far beyond its original makers (whether through their design or by accident) also needs to be considered, the authors argue.
Finally, life is tied to planets or at least moons, while technology can exist between worlds and even between star systems.
The authors state that while those involved in the Search for Extraterrestrial Intelligence are familiar with many of these arguments, they're less familiar to other astrobiologists.
To weigh these arguments, the authors modify the original Drake equation to produce two Drake-like versions that estimate the numbers of technological or biological signatures to be found. As with the original version, each requires estimating the chance of various events, often with little to go on.
Will one in a hundred planets that host life eventually evolve a technologically advanced civilization, or one in a million? No one knows, but many people have opinions. Where spaceflight is achieved, will it on average lead to the colonization of a handful of planets, or millions? The answer is equally uncertain. Depending on which numbers you pick, the authors note one could conclude biological signatures far outnumber technological ones, or the reverse.
An objective, quantitative comparison of the actual relative abundances of technosignatures and biosignatures is difficult because it depends on details of extraterrestrial life that we cannot know for certain until we have some examples to learn from, the paper notes.
On the other hand, we can probably be more certain that where technology exists, it will be easier to find than signs of life at least as long as it is still operating, rather than a colossal wreck. Technological signals are also less likely to be ambiguous.
When astronomers such as Frank Drake were first contemplating the question, they had little choice in the matter. We could search for signs of biology on Mars and perhaps elsewhere in the Solar System, but anywhere further afield would depend on radio signals. We couldn't even detect more distant planets, let alone examine their atmospheres for gasses indicative of life.
Today we know of thousands of exoplanets, some potentially capable of supporting life. Forthcoming telescopes may allow us to find evidence if it is there, at least in closer examples. Much as the JWST will transform other areas of astronomy, the authors think we'll get more value for money when it comes to finding life from the Square Kilometer Array, with its massively enhanced capacity to detect radio signals.
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Technology May Beat Biology When It Comes To Finding Alien Signatures, Scientists Argue - IFLScience
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The CEO of an exclusive jet carrier says he ‘kissed a lot of frogs’ before landing a Wi-Fi deal with SpaceX – Business Insider India
Posted: at 10:17 pm
Hop-on jet service JSX spent years trying to find the right in-flight Wi-Fi before SpaceX's Starlink came along, its CEO Alex Wilcox said.
Elon Musk's SpaceX signed its first deal last week to offer its Starlink satellite internet for free onboard planes of JSX, a semi-private regional carrier which was founded six years ago.
Wilcox told Insider that Wi-Fi onboard its planes was the number one request from customers, especially when the company started to offer longer haul trips across the US.
JSX spoke to various internet providers before they realised Starlink was the perfect match. The jet service firm had been in talks with Starlink for around a year, Wilcox said.
"We've kissed a lot of frogs," said Wilcox, who is also a founding executive of JetBlue.
Other internet providers would have required JSX to stick huge antennas, which connect to satellites, onto its aircraft but these weren't compatible with the company's small, 30-seater jets, Wilcox said. JSX even tried to convince the providers to make a different antenna, but the market was too small, he added.
Whereas Starlink only required an antenna, which is 50 centimeters by 50 centimeters big and can be mounted on top of the plane, Wilcox said.
Wilcox described Starlink's technology as "compact" and "lightweight." The antenna doesn't add any fuel burn, nor does it have any drag to the plane, he said.
JSX also chose Starlink for its fast speed and low latency, given that the satellites are positioned in low-Earth orbit and are therefore closer to the aircraft and Earth, Wilcox said. Other internet providers' launch their satellites into geostationary orbit, which takes longer for the signal to travel.
"When you consider most of the other providers, the in-flight Wi-Fi is the hardest thing they do," he said. "When you consider SpaceX and the other things they're trying to achieve, this is the easiest thing they're trying to do."
Starlink is a subsidiary of SpaceX, a company which builds rockets designed to fly to the moon and other planets, and one day help with the colonization of Mars.
Passengers selecting Starlink WiFi on their devices while cruising on JSX jets won't be faced with a log-in screen, terms and conditions to accept, or credit card details.
"You'll accept all of that stuff when you buy your ticket," Wilcox said, confirming that the Wi-Fi service will be free.
JSX is different from major airlines because it offers more of an exclusive journey. Customers pay more to fly with JSX but in return, they receive free cocktails, snacks, baggage check, and carry-ons. They can also turn up to the flight 20 minutes before departure, Wilcox said.
Starlink will "make our customers' lives easier," Wilcox added.
Within days of signing the deal, Starlink engineers were on JSX's site testing the service on planes, Wilcox said.
The aim is to have half of its fleet of 77 planes equipped with Starlink by December this year. The other half will be kitted out by the end of next year, Wilcox said. The deal between JSX and Starlink covers service on up to 100 planes.
As part of the tests, Starlink has to make sure the antenna doesn't interfere with the safety and operation of the plane and ensure it won't get damaged by ice or other weather conditions, Wilcox said.
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Should the Comms Pro Think Like a Futurist During This Uncertain Time? – PR News – For Smart Communicators
Posted: at 9:55 pm
One of the few certainties during the period were living in is how uncertain it is. That makes communication more complex. Communicators know flexibility and adaptability are vital in message creation at a time of potential global political instability, inflation and possible recession, supply chain hang-ups and a pandemic that lingers. Still, even experienced communicators stumble.
There are few things more uncertain than COVID. Even as mask mandates are lifted, the virus pokes through. For instance, at our press time, media reports warned of rising COVID levels in NYC. Certainly, COVID infection rates, hospitalizations and deaths are not at previous levels there. Still, NYC health officials are urging additional caution. And they are considering reauthorizing indoor masking.
"We know a lot more about the virus now than we did in 2020, and businesses have learned to adapt," says Katherine Harris Griffith, VP, Elizabeth Christian PR. Still, she concedes, "It's important for companies to pay attention to the virus and what it's doing in the communities they serve...
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Should PR Pros Think Like Futurists During This Uncertain Time? – PRNEWS – PR News – For Smart Communicators
Posted: at 9:55 pm
One of the few certainties during the period were living in is how uncertain it is. That makes communication more complex. Communicators know flexibility and adaptability are vital in message creation at a time of potential global political instability, inflation and possible recession, supply chain hang-ups and a pandemic that lingers. Still, even experienced communicators stumble.
There are few things more uncertain than COVID. Even as mask mandates are lifted, the virus pokes through. For instance, at our press time, media reports warned of rising COVID levels in NYC. Certainly, COVID infection rates, hospitalizations and deaths are not at previous levels there. Still, NYC health officials are urging additional caution. And they are considering reauthorizing indoor masking.
"We know a lot more about the virus now than we did in 2020, and businesses have learned to adapt," says Katherine Harris Griffith, VP, Elizabeth Christian PR. Still, she concedes, "It's important for companies to pay attention to the virus and what it's doing in the communities they serve...
This Content is Available Exclusively to PRNEWS Subscribers
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Should PR Pros Think Like Futurists During This Uncertain Time? - PRNEWS - PR News - For Smart Communicators
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The leading world futurists and scientists are interested in the development of Africa – Yahoo Finance
Posted: at 9:55 pm
Gen4ir.org
Get your ticket here: https://taffds.org
JOHANNESBURG, South Africa, May 03, 2022 (GLOBE NEWSWIRE) -- The Transdisciplinary Agora For Future Discussions (TAFFD's) will gather the leading futurists all over the world during the Gen4IR Global Summit in South Africa. The event will take place at the beautiful Sun City resort in Johannesburg in the middle of August.
The event which is now slated August 16-17 2022 because of the aims to converge scientist, and industrial experts from diverse disciplines.
We are working with relevant authorities through our crucial government partners to ensure ease of travel to SA. The move of the summit to August will therefore offer the best chance for all participants to attend in person and maximize face-to-face interaction, networking opportunities, and planning productive endeavors for the future. - commented Brenda Kgomotsego Ramokopelwa, CEO at TAFFDs.
The growing interest from the private and public sectors worldwide in our event will require full engagement by speakers and delegates. We will therefore use this time to offer regular context, podcasts, commentaries, Zoom events that will educate, enlighten, and inspire about the prosperous future of Africa that the August summit will help unleash. We apologize for any inconvenience this move might have caused and hope to see you this August in South Africa. We thank you for your interest in the Gen4IR summit and hope you will engage with us as we lead up to our exciting event! - snkch km Kl, founder at TAFFDs.
Africa, with its status as having the youngest population on Earth, is strategically positioned at the forefront of the global race to be the 4IR powerhouse thanks to boundlessly creativity of African youth experienced in using tools, ideas and skills in overcoming of the myriad real-life challenges, and vast resources of the world digital technologies and startups, who are interested in this raising market. Over a million years ago, the making of stone chopping tools and the stone hand axe at Olduvai Gorge of the East African Rift Valley represented the first step in the great human journey of shaping our world and for many millions of years. The stone hand axe from Africa remained the innovative technology, which was needed by and accompanied our ancestors as they spread out of Africa and across the world. Indeed, as our tools evolve so do our ideas, and then as our tools and ideas evolve, so also do we. Our current 21st century world and humankind through a new set of modern tools characterized as exponential technologies, stands again at the verge of another radical evolution - a Fourth Industrial Revolution (4IR) - and just as with the story of our origins, the future of this technological revolution lies again in the promise of Africa.
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Currently, among the speakers of the Gen4IR conference are Ai Karaki, 4iAfrica; David Wood, futurists; Aubrey De Grey, PhD, Biomedical Gerontologist; Natasha Vita More, PhD; Jose Louis Codeiro, MIT Engineer, Immortalist; Edward Hudgins, Futurist, Human Achievement Alliance; Dr. Catherine Demetriades, Inventor of Cxai technologies and Actual Intelligence; Dr. Sarita Sharma, Author of Myriad Voices, Days V.; Ugo Chukwu, Futurist; and many more. We deliver you 4 Key mindsets and an understanding of the exponential technologies required for you. Lets make Africa great again!
For more information, kindly visit gen4ir.org or email 2022summit@gen4ir.org.
Contact:Victoria UstimenkoGlobal Head of MarketsTelegram: @air_cloudsSignal: +7 967 181 8317TAFFD's pr@taffds.org
A photo accompanying this announcement is available at https://www.globenewswire.com/NewsRoom/AttachmentNg/ddb55972-a38a-4e64-987f-dbc4aa09226f
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The leading world futurists and scientists are interested in the development of Africa - Yahoo Finance
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