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Category Archives: Transhuman News
A New Method for Isolating and Genome Sequencing Malaria Parasites Will Aid in the Understanding of These Infections
Posted: May 9, 2014 at 12:44 pm
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Newswise A new method for isolating and genome sequencing an individual malaria parasite cell has been developed by Texas Biomed researchers in San Antonio and their colleagues. This advance will allow scientists to improve their ability to identify the multiple types of malaria parasites infecting patients and lead to ways to best design drugs and vaccines to tackle this major global killer. Malaria remains the worlds deadliest parasitic disease, killing 655,000 people in 2010.
Malaria parasite infections are complex and often contain multiple different parasite genotypes and even different parasite species. So when researchers take a blood sample from a malaria infected patient, and look at the parasite DNA within they end up with a complex mixture that is difficult to interpret.
"This has really limited our understanding of malaria parasite biology" says Ian Cheeseman, Ph.D., who led this project. Its like trying to understand human genetics by making DNA from everyone in a village at once. The data is all jumbled up what we really want is information from individuals.
To achieve a better understanding of malaria parasites single celled organisms that infect red blood cells Cheeseman and colleague Shalini Nair, developed a novel method for isolating an individual parasite cell and sequencing its genome. These single cell genomics approaches have been adopted in cancer research to identify how tumors evolve during the progression of a disease but it has been difficult to adapt them to other organisms.
One of the real challenges was learning how to cope with the tiny amounts of DNA involved. In a single cell we have a thousand million millionth of a gram of DNA. It took a lot of effort before we developed a method where we simply didnt lose this, said Nair, the first author on the work.
Their method is set to change how researchers think about infections. One of the major surprises we found when we started looking at individual parasites instead of whole infections was the level of variation in drug resistance genes. The patterns we saw suggested that different parasites within a single malaria infection would react very differently to drug treatment said Nair. Were now able to look at malaria infections with incredible detail. This will help us understand how to best design drugs and vaccines to tackle this major global killer, Cheeseman added.
A paper describing this work, funded by the Texas Biomedical Forum, National Institutes of Health, a Cowles Postdoctoral Training Fellowship and the Wellcome Trust, was published online May 8 in the journal Genome Research. The work was led by Texas Biomeds Cheeseman with collaborators at the University of Texas Health Science Center San Antonio, Case Western Reserve University, the Cleveland Clinic Lerner Research Institute, the Shoklo Malaria Research Unit, Thailand, and the Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Malawi. The other Texas Biomed author on is Tim Anderson, Ph.D.
This work was supported by a US National Institutes of Health grant No. R37AI048071. Cheeseman can be reached through Jim Dublin at jdublin@dublinandassociates.com or 210-227-0221.
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A New Method for Isolating and Genome Sequencing Malaria Parasites Will Aid in the Understanding of These Infections
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Penn yeast study identifies novel longevity pathway
Posted: at 12:44 pm
PUBLIC RELEASE DATE:
8-May-2014
Contact: Karen Kreeger karen.kreeger@uphs.upenn.edu 215-349-5658 University of Pennsylvania School of Medicine
PHILADELPHIA - Ancient philosophers looked to alchemy for clues to life everlasting. Today, researchers look to their yeast. These single-celled microbes have long served as model systems for the puzzle that is the aging process, and in this week's issue of Cell Metabolism, they fill in yet another piece.
The study, led by researchers at the University of Pennsylvania, identifies a new molecular circuit that controls longevity in yeast and more complex organisms and suggests a therapeutic intervention that could mimic the lifespan-enhancing effect of caloric restriction, no dietary restrictions necessary. After all, says senior author Shelley Berger, PhD, "who wants to live on 500 calories a day?"
Berger, a Penn Integrates Knowledge Professor in the departments of Genetics and Cell and Developmental Biology at the Perelman School of Medicine and the department of Biology in the School of Arts and Sciences, studies epigenetics, the science of the control of genetic information. Epigenetics comprises multiple regulatory layers, including chromatin packaging -- the orderly wrapping of DNA around histone proteins in the cell nucleus. By altering this DNA packaging, cells can control when and how genes are expressed.
"Aging is, in part, the accumulation of cellular stress," she explains. "If you can better respond to these stresses, this ameliorates the damage it can cause."
Berger and her team looked for chromatin-associated genes that could influence longevity by searching for genes that already were implicated in epigenetic regulation that might extend lifespan when deleted in the yeast, Saccharomyces cerevisiae. One such gene improved lifespan by about 25 percent this would correspond to an increased lifespan in humans from 75 years to about 95 years a substantial benefit to longevity, notes Berger. The research, conducted by postdoctoral fellow Weiwei Dang, PhD, aimed to unravel how this increase in longevity was achieved and if it was related to cellular stress.
First, the team asked whether the gene ISW2 is part of previously identified longevity pathways, especially those associated with caloric restriction, a well-known strategy for extending lifespan. But pathways involving a form of chromatin modification (histone acetylation) came up empty, as did an alternate pathway involving growth control, suggesting ISW2 functions through a never-before-seen mechanism.
The team then looked for answers in the function of the ISW2 protein, and found that its absence alters the expression of genes involved in protecting cells from such stresses as DNA damage. Deletion of ISW2 increases the expression and activity of genes in DNA-damage repair pathways an effect also seen during calorie restriction.
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Penn yeast study identifies novel longevity pathway
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Yeast study identifies novel longevity pathway
Posted: at 12:44 pm
Ancient philosophers looked to alchemy for clues to life everlasting. Today, researchers look to their yeast. These single-celled microbes have long served as model systems for the puzzle that is the aging process, and in this week's issue of Cell Metabolism, they fill in yet another piece.
The study, led by researchers at the University of Pennsylvania, identifies a new molecular circuit that controls longevity in yeast and more complex organisms and suggests a therapeutic intervention that could mimic the lifespan-enhancing effect of caloric restriction, no dietary restrictions necessary. After all, says senior author Shelley Berger, PhD, "who wants to live on 500 calories a day?"
Berger, a Penn Integrates Knowledge Professor in the departments of Genetics and Cell and Developmental Biology at the Perelman School of Medicine and the department of Biology in the School of Arts and Sciences, studies epigenetics, the science of the control of genetic information. Epigenetics comprises multiple regulatory layers, including chromatin packaging -- the orderly wrapping of DNA around histone proteins in the cell nucleus. By altering this DNA packaging, cells can control when and how genes are expressed.
"Aging is, in part, the accumulation of cellular stress," she explains. "If you can better respond to these stresses, this ameliorates the damage it can cause."
Berger and her team looked for chromatin-associated genes that could influence longevity by searching for genes that already were implicated in epigenetic regulation that might extend lifespan when deleted in the yeast, Saccharomyces cerevisiae. One such gene improved lifespan by about 25 percent -- this would correspond to an increased lifespan in humans from 75 years to about 95 years -- a substantial benefit to longevity, notes Berger. The research, conducted by postdoctoral fellow Weiwei Dang, PhD, aimed to unravel how this increase in longevity was achieved and if it was related to cellular stress.
First, the team asked whether the gene ISW2 is part of previously identified longevity pathways, especially those associated with caloric restriction, a well-known strategy for extending lifespan. But pathways involving a form of chromatin modification (histone acetylation) came up empty, as did an alternate pathway involving growth control, suggesting ISW2 functions through a never-before-seen mechanism.
The team then looked for answers in the function of the ISW2 protein, and found that its absence alters the expression of genes involved in protecting cells from such stresses as DNA damage. Deletion of ISW2 increases the expression and activity of genes in DNA-damage repair pathways -- an effect also seen during calorie restriction.
The gene ISW2, it turns out, is involved in chromatin remodeling -- it controls the spacing and distribution of the histone "spools" around which DNA wraps. Normally, ISW2 dampens stress-response pathways, possibly because overactivation of these pathways is deleterious early in life, Berger speculates. Deletion or inactivation of the ISW2 gene activates those pathways, priming the cells to more effectively handle stress-associated genetic scars as cells age.
This effect is not limited to yeast. When Berger's team reduced the levels of a related gene in the nematode worm, Caenorhabditis elegans, they observed a 15 percent improvement in longevity, which is similar in magnitude to the lifespan extension observed in other worm longevity pathways. Similarly, knocking down expression of a human homolog in cultured human cells boosted the expression of stress-response genes that, again, like yeast, occur in DNA-damage repair pathways.
These findings suggest a pathway analogous to the one identified in yeast performs a similar function in humans, keeping stress-response genes in check -- and if inhibited, could boost these pathways. But that has yet to be established. And, it is far from clear if tweaking these pathways can actually extend healthy human lifespan -- but, of course, a goal worthy of further investigation, say the authors.
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Black Death Survivors and Their Descendants Went On to Live Longer
Posted: at 12:44 pm
The plague preferentially killed the very old and those already in poor health. Natural selection or better diets may have allowed those who remained to thrive
A depiction of the black death from a 15th-century Bible
The Black Death, a plague that first devastated Europe in the 1300s, had a silver lining. After the ravages of the disease, surviving Europeans lived longer, a new study finds.
An analysis of bones in London cemeteries from before and after the plague reveals that people had a lower risk of dying at any age after the first plague outbreak compared with before. In the centuries before the Black Death, about 10 percent of people lived past age 70, said study researcher Sharon DeWitte, a biological anthropologist at the University of South Carolina. In the centuries after, more than 20 percent of people lived past that age.
"It is definitely a signal of something very important happening with survivorship," DeWitte told Live Science. [Images: 14th-Century Black Death Graves]
The plague years
The Black Death, caused by the Yersinia pestis bacterium, first exploded in Europe between 1347 and 1351. The estimated number of deaths ranges from 75 million to 200 million, or between 30 percent and 50 percent of Europe's population. Sufferers developed hugely swollen lymph nodes, fevers and rashes, and vomited blood. The symptom that gave the disease its name was black spots on the skin where the flesh had died.
Scientists long believed that the Black Death killed indiscriminately. But DeWitte's previous research found the plague was like many sicknesses: It preferentially killed the very old and those already in poor health.
That discovery raised the question of whether the plague acted as a "force of selection, by targeting frail people," DeWitte said. If people's susceptibility to the plague was somehow genetic perhaps they had weaker immune systems, or other health problems with a genetic basis then those who survived might pass along stronger genes to their children, resulting in a hardier post-plague population.
In fact, research published in February in the journal Proceedings of the National Academy of Sciences suggested that the plague did write itself into human genomes: The descendants of plague-affected populations share certain changes in some immune genes.
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Black Death Survivors and Their Descendants Went On to Live Longer
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Eczema Healthy Diet Cure – Video
Posted: at 12:44 pm
Eczema Healthy Diet Cure
FULL ECZEMA INFO AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which the skin develops areas of itchy, scaly rashes....
By: Stacy Wolers
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Eczema Healthy Diet Cure - Video
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Eczema Treatment – Newly Launched Products Often Available Online First – Video
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Eczema Treatment - Newly Launched Products Often Available Online First
FULL ECZEMA INFO AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which the skin d...
By: Stacy Wolers
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Information on Eczema – Incorporate These Superfoods For Glorious Skin Health – Video
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Information on Eczema - Incorporate These Superfoods For Glorious Skin Health
FULL ECZEMA INFO AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which the skin d...
By: Stacy Wolers
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Eczema Care – Develop Your Plan of Attack – Video
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Eczema Care - Develop Your Plan of Attack
COMPLETE CURE FOR ECZEMA AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which th...
By: Jim Perdush
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Eczema Care - Develop Your Plan of Attack - Video
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Best Way to Cure Eczema Quickly – Learn How to Make the Itching and Burning Stop – Video
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Best Way to Cure Eczema Quickly - Learn How to Make the Itching and Burning Stop
COMPLETE CURE FOR ECZEMA AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which the skin develops areas of itchy,...
By: Jim Perdush
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Best Way to Cure Eczema Quickly - Learn How to Make the Itching and Burning Stop - Video
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Side Effects of Eczema and Treatment – Video
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Side Effects of Eczema and Treatment
COMPLETE CURE FOR ECZEMA AT: http://www.VanishEczema.net What is eczema? Eczema, also known as atopic dermatitis, is a chronic allergic condition in which th...
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Side Effects of Eczema and Treatment - Video
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