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Category Archives: Transhuman News

Call of Duty:AW DNA Bomb! – Video

Posted: November 27, 2014 at 1:50 pm


Call of Duty:AW DNA Bomb!
Watch As cushioned Gaming Gets A DNA Bomb! Call of Duty: Advanced Warfare https://store.sonyentertainmentnetwork.com/#!/tid=CUSA00803_00.

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DNA Can Survive Reentry from Space

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Genetic blueprints attached to a rocket survived a short spaceflight and later passed on their biological instructions

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If a cascade of meteors struck Earth billions of years ago, could they have deposited genetic blueprints and forged an indelible link between Earth and another planet? Perhaps. Although that puzzling question remains unanswered, scientists have uncovered a new clue that suggests it is possible for DNA to withstand the extreme heat and pressure it would encounter when entering our atmosphere from space. In a new study published today in PLOS ONE, a team of Swiss and German scientists report that they dotted the exterior grooves of a rocket with fragments of DNA to test the genetic materials stability in space. Surprisingly, they discovered that some of those building blocks of life remained intact during the hostile conditions of the flight and could pass on genetic information even after exiting and reentering the atmosphere during a roughly 13-minute round trip into space. The findings suggest that if DNA traveled through space on meteorites, it could have conceivably survived, says lead author Oliver Ullrich of the University of Zurich. Moreover, he says, DNA attached to a spacecraft has the potential to contaminate other celestial bodies, making it difficult to determine whether a life form existed on another planet or was introduced there by spacecraft. The rocket test may fall short of representing the faster speed and higher energy of a meteor hurtling into our atmosphere, but it does suggest that even if the outside of a meteor was scorched, genetic material in certain places on the meteor could survive higher temperatures than scientists had previously realized and make it to Earth. The findings are a stop on the way to understanding what the limits are for DNAs survival, says research scientist Christopher Carr of the Massachusetts Institute of Technology, who was not involved with the work but called the results provocative. The next steps, he says, would be to further pin down what temperature and pressure would ultimately kill DNA. To test the effect of the hostile reentry conditions, Ullrichs team embedded specially designed plasmid DNA a circular thread of DNA that would not function if it were damaged and lost its loop shape along the exterior of the craft in grooves and in the indentations of screw heads. Temperatures on the exterior of the rocket reached as high as 115.4 degrees Celsius during liftoff and 128.3 degrees Celsius during atmospheric reentry (by comparison, water boils at 100 degrees Celsius). Still, the plasmid DNA survived. The researchers were intrigued to find that the DNA looked intact under a microscope. They also put some of the samples to work to see if the DNA remained functionally capable of passing on genetic instructions. The team exposed Escherichia coli bacteria to the space-traveling DNA. If the plasmid DNA were intact as it proved to be the E. coli would be able to take up the DNA, and that piece of genetic code would make the bacteria resistant to antibiotics. According to Ullrich, the researchers were surprised to find that the DNA passed on its information and the E. coli became drug resistant. The findings are definitely exciting, Carr says. Earlier work had already revealed that certain bacteria could survive in space for prolonged periods despite intense ultraviolet and cosmic radiation, especially when they were partly shielded from such harmful rays by natural protectants like biofilm. Although those experiments suggested that certain hardy microbes could survive at least 1.5 years in space, there has been no firm evidence that DNA could also survive reentry. In fact, in earlier experiments, bacteria and fungi did not survive after being embedded in rock samples mounted on the outside of a capsule and shot into space. The die-off in those experiments was due to damage on the DNA level, Ullrichs team notes. The difference in this new work, Ullrich says, may have been the modicum of protection the DNA had due to its placement in grooves or screw heads. In the earlier experiments, reentry conditions had very high velocities and temperatures, and the protective layer from surrounding rocks was likely too thin to protect the microorganisms, he says. Indeed, researchers have never seen DNA survive reentry into the atmosphere until now, although one study did find that bacteria survived the reentry, disintegration and impact of the space shuttle Columbia. This first evidence of plasmid DNAs survival also suggests that in the future, DNA tests could be considered as a standard for measuring the effectiveness of decontamination procedures used in space programs. Returning spacecraft are routinely cleaned to protect Earth against the possibility of accidental contact with alien microbes. In the larger picture, Carr says, the new study gets us thinking what controlled experiments we should do to explore the limit for life and what the limit is for DNA.

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Space Surprise! DNA Survives Trip on a Rocket's Surface

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The substance that holds the code for life may be able to survive a short ride in space, a new study suggests.

Samples of DNA squirted onto the exterior of a TEXUS-49 sounding rocket remained functional following a 13-minute suborbital spaceflight, the study's scientists report.

"We were totally surprised. ... Our findings made us a little bit worried about the probability of contaminating spacecrafts, landers and landing sites with DNA from Earth," Cora Thiel, a molecular biologist at the University of Zurich and a lead author of the study, said in a statement. [How to Protect Other Planets from Earth Microbes]

A TEXUS-49 rocket lifts off from the Esrange Space Center in Kiruna, northern Sweden, carrying plasmid DNA on its exterior. Scientists were surprised to find that the DNA survived the 13-minute flight.

Thiel conducted the experiment along with Oliver Ullrich, a biochemist at the University of Zurich as well as the University of Magdeburg in Germany.

Thiel and Ullrich put an experiment inside the payload bay of a TEXUS-49 rocket set for launch from the Esrange Space Center in Kiruna in northern Sweden, to study the effect of weightlessness on DNA and its ability to function.

During flight preparations, Thiel and Ullrich decided to put some DNA on the exterior of the rocket as well: around the outside of the payload, in the grooves of the screw heads, and underneath the payload. When the rocket returned, the researchers found at least a small amount of DNA in all three locations. They said as much as a third of the DNA was still functional.

The DNA used in the experiment was not chromosomal DNA the kind found in humans and most living organisms but rather plasmid DNA, which is found in some bacteria and operates slightly differently than chromosomal DNA. Plasmid DNA is around 10 times smaller than bacterial chromosomal DNA, Ullrich said.

"We cannot say how these big chromosomal DNA molecules would react under the same conditions, and this should be investigated in a separate experiment," Ullrich told Space.com in an email. "However, we speculate that small plasmid DNA molecules might be more resistant to re-entry conditions than chromosomal DNA, which is also packed with proteins."

The study was published Wednesday in the journal PLOS ONE.

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Space Surprise! DNA Survives Trip on a Rocket's Surface

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DNA survives sub-orbital trip on the exterior of a rocket

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DNA molecules smeared onto the exterior of a sub-orbital test rocket are capable of surviving a 13-minute trip into space and a scorching re-entry, European researchers say.

The scientists' surprising finding, which was published Wednesday in the journal PLOS One, suggests that genetic material is hardier than previously thought and may have the potential to stow away on robotic landers bound for other worlds, or within meteors, the report said.

"It is conceivable that life exists independently from our planet even under the very hostile conditions prevailing on our neighbors like Mars," wrote senior study author Dr. Oliver Ullrich, a molecular biologist at the University of Zurich, and his colleagues.

"Already on Earth we are able to identify some extreme life forms which can survive physically and/or geochemically harsh conditions, such as very high or low temperatures, intense radiation, pressure, vacuum, desiccation, salinity and pH. Many of these parameters also prevail in space and therefore the question is whether terrestrial organisms are able to survive a voyage through space."

The experiment was conducted on the TEXUS-49 rocket mission that blasted off from Sweden in March 2011. The launch was part of a sounding rocket program in which instruments and experiments are launched into sub-orbital space for brief periods.

Researchers engineered plasmid DNA, or small ring-like strings of genetic material, that would confer special qualities to transfected cells, such as making bacteria resistant to certain antibiotics or making mouse tissue cells glow under ultraviolet light.

By engineering the plasmid DNA in this way, they would be able to see whether it was still functional when the rocket returned to Earth.

The researchers applied the DNA to various locations on the exterior of the rocket, including a number of screw heads. During the experimental flight, the material was lofted 166 miles high and subjected to 6.3 G's of thrust, six minutes of microgravity and temperatures higher than 1,832 degrees, the researchers said.

When the rocket payload was recovered, scientists collected some DNA from all of the application sites and found that as much as 35% had retained its full biological function, they said.

The authors said they were very surprised by the results.

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DNA may survive suborbital spaceflight, re-entry

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Plasmid DNA attached to the outer surface of a sounding rocket may be able to withstand rocket launch, a period of residence in suborbital space, re-entry, and landing conditions into the Earth's atmosphere, all the while staying intact and active in its function as carrier of genetic information, according to a study published November 26, 2014 in the open-access journal PLOS ONE by Cora Thiel and Oliver Ullrich from University of Zurich and colleagues.

DNA plays an important role as a biomarker for the search of extraterrestrial signatures of life, and scientists are working to characterize and compare the influence of Earth and space conditions on DNA. The authors of this study designed a test to analyze the biological effects of suborbital spaceflights using the TEXUS-49 rocket mission in March 2011. They attached artificial plasmid DNA carrying a fluorescent marker and an antibiotic resistance gene cassette at three different positions on the rocket exterior, where outer gas temperatures were estimated at over 1000C during the short 780 second flight.

Researchers analyzed the samples immediately after the flight, and the results showed that DNA survives to varying degrees in all cases, and in particular, even after application of temporary heating up to 1000C. Subsequent analyses showed that DNA could be recovered from all application sites on the exterior of the rocket, with a maximum of 53% in the grooves of the screw heads. Up to 35% of DNA retained its full biological function, as shown by its ability to successfully confer antibiotic resistance to bacteria, and to drive expression of a fluorescent marker in eukaryotic cells. The authors suggest this experimental design may establish a robust and universal functionality assay to test for the stability of DNA during an atmospheric transit and re-entry, as well as a model for nucleic acids that could serve as biomarkers in the search for past or present extraterrestrial life.

Prof. Ullrich and Dr. Thiel added: "We were totally surprised. Originally, we designed this experiment as a technology test for biomarker stability during spaceflight and re-entry. We never expected to recover so many intact and functional active DNA. But it is not only an issue from space to Earth, it is also an issue from Earth to space and to other planets: Our findings made us a little bit worried about the probability of contaminating space crafts, landers and landing sites with DNA from Earth."

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In your coverage please use this URL to provide access to the freely available paper: http://dx.plos.org/10.1371/journal.pone.0112979

Citation: Thiel CS, Tauber S, Schutte A, Schmitz B, Nuesse H, et al. (2014) Functional Activity of Plasmid DNA after Entry into the Atmosphere of Earth Investigated by a New Biomarker Stability Assay for Ballistic Spaceflight Experiments. PLoS ONE 9(11): e112979. doi:10.1371/journal.pone.0112979

Funding: Support was provided by the German Aerospace Center (DLR) through grant no. 50WB0912. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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UW Genome Sciences – Wednesday Evenings at the Genome: Dr. Mary Kuhner – Video

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UW Genome Sciences - Wednesday Evenings at the Genome: Dr. Mary Kuhner
July 16, 2014 "Evolutionary Forensics: Where Did That Come From?"

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UW Genome Sciences – Wednesday Evenings at the Genome: Dr. George Martin – Video

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UW Genome Sciences - Wednesday Evenings at the Genome: Dr. George Martin
July 10, 2013 "How Nature, Nurture and Chance Shapes How We Age"

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Centipede's genome reveals how life evolved on our planet

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Centipedes, those many-legged creatures that startle us in our homes and gardens, have been genetically sequenced for the first time. In a new study in the journal PLOS Biology, an international team of over 100 scientists today reveals how this humble arthropod's DNA gave them new insight into how life developed on our planet.

Centipedes are members of the arthropods, a group with numerous species including insects, spiders and other animals. Until now, the only class of arthropods not represented by a sequenced genome was the myriapods, which include centipedes and millipedes. For this study, the researchers sequenced the genome of the centipede Strigamia maritima, because its primitive features can help us understand more complex arthropods.

According to Prof. Ariel Chipman, senior co-author of the study and project leader at the Hebrew University of Jerusalem's Alexander Silberman Institute of Life Science, the genetic data reveal how creatures transitioned from their original dwelling-place in the sea to living on land.

"The use of different evolutionary solutions to similar problems shows that myriapods and insects adapted to dry land independently of each other," said Chipman. "For example, comparing the centipede and insect genomes shows that they independently evolved different solutions to the same problem shared by all land-dwelling creatures -- that of living in dry air."

According to Chipman, the study found that despite being closely related to insects, the centipede lacks the olfactory gene family used by insects to smell the air, and thus developed its own air-sniffing ability by expanding other gene families not present in insects.

In addition, Chipman said, this specific group of centipedes live underground and have lost their eyes, together with almost all vision genes and genes involved in the body's internal clock. They maintain enhanced sensory capabilities enabling them to recognize their environment and capture prey.

Published in the latest edition of PLOS Biology, the research is a collaborative effort by over 100 scientists from 50 institutions. Thousands of human-hours went into looking at specific genes in the centipede genome, with each researcher looking at a limited set of genes or at specific structural characteristics to address specific questions.

Other leaders of the international research effort include Dr. Stephen Richards, Baylor College of Medicine; Dr. David Ferrier, University of St. Andrews; and Prof. Michael Akam of Cambridge University. The research paper is titled "The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima."

While early studies of genomics focused on humans, as sequencing equipment and expertise became more readily available, researchers expanded into animals directly relevant to human wellbeing. In the latest research, genomic sequencing has become more broad-based, investigating the workings of the world around us.

In explaining the purpose of the research, Hebrew University's Chipman said: "If we have a better understanding of the biological world around us, how it operates, and how it came to be as it is, we will ultimately have a better understanding of ourselves."

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Africa: Genome of Tapeworm Found in Man's Brain Sequenced

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By Geoffrey Giller

Researchers have sequenced the genome of a rare, ten centimetre-long, ribbon-shaped tapeworm that had been travelling through a man's brain for four years in a move that could lead to new treatments for tapeworm infections.

Tapeworms usually infect the gut, causing symptoms such as weakness, weight loss and abdominal pain. But the larvae of some species can reach the eyes, brain and spinal cord. The species in this case, Spirometra erinaceieuropaei, is one such parasite.

Human infections caused by the larvae from this and closely related species are known as sparganosis. Although these species are found worldwide, such medical cases are most common in Asian countries such as China, Japan, South Korea and Thailand.

Other tapeworm species have a greater worldwide impact, for example causing neglected tropical diseases such as seizure-causing neurocysticercosis and potentially fatal alveolar echinococcosis.

In the case at the heart of the new research, a man of Chinese ethnicity living in the United Kingdom but who frequently visited China sought treatment in 2008, complaining about headaches, seizures, memory loss and occasional episodes of altered smell.

An MRI scan showed small lesions in the man's brain. However, numerous tests for everything from HIV to tuberculosis came back negative.

Doctors monitored the lesions for four years and found something strange: they moved around. Only when doctors operated on the man in 2012 did they discover the ten centimetre-long tapeworm living in his head.

The reason it took so long to diagnose, says Hayley Bennett, a researcher at the Wellcome Trust Sanger Institute, United Kingdom, and the lead author of a paper on the research published last week (21 November) in Genome Biology, is that infection by this particular type of worm is exceedingly rare.

"That was the first time this worm has ever been seen in the UK," she says. "I think the clinicians were pretty surprised."

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Human Longevity, Inc. Signs Collaborative Agreement with …

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LA JOLLA, Calif., Nov. 13, 2014 /PRNewswire/ -- Human Longevity, Inc. (HLI), a biological data-driven human health technology and cell therapy company, today announced a collaborative agreement with King's College London to access their TwinsUK Registry.

Tim Spector, MD, Professor of Genetic Epidemiology, King's College London, and Director of the Department of Twin Research and Genetic Epidemiology at St. Thomas' Hospital, London started the registry in 1993. HLI and Dr. Spector will collaborate directly as part of the agreement. With more than 11,000 twin individuals, the Registry is one of the most comprehensive collections of genome and microbiome samples paired with phenotype information in the world.

HLI will conduct whole genome and microbiome sequencing on up to 2,000 individuals, along with metabolomic analysis on up to 6,000 longitudinal samples in TwinsUK. HLI is working with the company Metabolon to perform the metabolite profiling.

HLI is currently sequencing and analyzing 2,000 genomes per month using Illumina's HiSeq X Ten sequencing machines. The combined high quality, comprehensive data will continue to enrich the HLI Database and HLI Knowledge Base, which includes the company's proprietary informatics analysis and data interpretation and integration. The Database and Knowledge Base form the core of HLI's business. The company is pursuing agreements with a variety of customers including pharmaceutical and biotech companies, academic health systems, governments and insurers.

"The TwinsUK Registry is one of the largest and best characterized databases of individuals in the world," said J. Craig Venter, PhD, HLI's Co-founder, Chairman, and Chief Executive Officer. "Having access to the clinical phenotype information collected by Dr. Spector and his team will greatly enhance our Database and Knowledge Base, and will enable the teams to collaborate on identifying correlations between phenotypes and genetic predisposition to disease and health."

Dr. Spector commented, "Combining our detailed health data collected for more than 21 years on the twins with new metagenomics of gut microbes and the exciting technology of metabolomics in longitudinal samples is an amazing opportunity. The next generation sequencing and analysis expertise of HLI, plus the unique data and design of the twin study, provides the perfect platform to unlock the clues to aging-related diseases and personalized medicine."

About Human Longevity, Inc. HLI, a privately held company headquartered in San Diego, CA was founded in 2013 by pioneers in the fields of genomics and stem cell therapy. Using advances in genomic sequencing, the human microbiome, proteomics, informatics, computing, and cell therapy technologies, HLI is building the world's most comprehensive database of human genotypes and phenotypes as a basis for a variety of commercialization opportunities to help solve aging related disease and human biological decline. HLI will be licensing access to its database, and developing new diagnostics and therapeutics as part of their product offerings. For more information please visit, http://www.humanlongevity.com

About King's College London (www.kcl.ac.uk)King's College London is one of the top 20 universities in the world (2014/15 QS World University Rankings) and the fourth oldest in England. It is The Sunday Times 'Best University for Graduate Employment 2012/13'.King's has nearly 26,000 students (of whom more than 10,600 are graduate students) from some 140 countries worldwide, and more than 7,000 staff. The College is in the second phase of a 1 billion redevelopment programme which is transforming its estate.

King's has an outstanding reputation for providing world-class teaching and cutting-edge research. In the 2008 Research Assessment Exercise for British universities, 23 departments were ranked in the top quartile of British universities; over half of our academic staff work in departments that are in the top 10 per cent in the UK in their field and can thus be classed as world leading. The College is in the top seven UK universities for research earnings and has an overall annual income of nearly 590 million.

King's has a particularly distinguished reputation in the humanities, law, the sciences (including a wide range of health areas such as psychiatry, medicine, nursing and dentistry) and social sciences including international affairs. It has played a major role in many of the advances that have shaped modern life, such as the discovery of the structure of DNA and research that led to the development of radio, television, mobile phones and radar.

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