GenomeNet

Posted: January 20, 2016 at 3:42 pm

GenomeNet Database Resources DBGET: Integrated Database Retrieval System DBGET search LinkDB search SPARQL endpoint available KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG2 - Table of contents KEGG PATHWAY - Systems information: pathways KEGG BRITE - Systems information: ontologies KEGG Organisms - Organism-specific entry points KEGG GENES - Genomic information KEGG LIGAND - Chemical information KEGG MEDICUS - Health information KEGG MGENES: Metagenome gene catalogs Virus-Host DB: Hosts of sequenced viruses New! Reaction Ontology: Reaction classifications varDB: Antigenic variation database Community Databases CYORF - Cyanobacteria annotation database BSORF - Bacillus subtilis genome database EXPRESSION - Gene expression profile database GenomeNet Bioinformatics Tools Sequence Analysis BLAST / FASTA - Sequence similarity search MOTIF - Sequence motif search CLUSTALW / MAFFT / PRRN - Multiple alignment RAxML / FastTree - Phylogenetic analysis New! Genome Analysis OC Viewer - KEGG ortholog clusters Updated! REST service is available KAAS - KEGG automatic annotation server Updated! MAPLE 2.1 - Functionome evaluator Updated! EGassembler - EST consensus contigs GENIES - Gene network prediction DINIES - Drug-target network prediction Chemical Analysis SIMCOMP / SUBCOMP - Chemical structure search REST service is available KCaM - Glycan structure search PathComp - Possible reaction path computation PathSearch - Similar reaction path search PathPred - Reaction pathway prediction E-zyme - Enzymatic reaction prediction

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