June 7, 2017 by Claudia Lutz Professor of Cell and Developmental Biology Lisa Stubbs leads the Gene Networks in Neural & Developmental Plasticity research theme at the Carl R. Woese Institute for Genomic Biology at the University of Illinois. Credit: Don Hamerman
Mice have a reputation for timidity. Yet when confronted with an unfamiliar peer, a mouse may respond by rearing, chasing, grappling, and bitingand come away with altered sensitivity toward future potential threats.
What changes in the brain of an animal when its behavior is altered by experience? Research at the University of Illinois led by Professor of Cell and Developmental Biology Lisa Stubbs is working toward an answer to this question by focusing on the collective actions of genes. In a recent Genome Research publication, Stubbs and her colleagues identified and documented the activity of networks of genes involved in the response to social stress.
"The goal of this study was to understand the downstream events in mice, and how they are conveyed across interacting brain regions . . . how they might set the stage for emotional learning in response to social threat," said Stubbs. Answers to these questions could help scientists understand how the brains of other animals, including humans, generate social behavior, as well as what goes wrong in disorders of social behavior.
The new results are part of a large-scale research project funded by the Simons Foundation that is headed by Stubbs and includes many of her coauthors, including first authors Michael Saul and Christopher Seward. Stubbs, Saul, Seward, and other coauthors are members of the Carl R. Woese Institute for Genomic Biology (IGB); Saul is an IGB Fellow and Seward is a graduate student.
An aggressive encounter between two mice is just one strand of the web of interactions that connects a population of social animals. Like individuals in a community, the genes in a genome cannot be completely understood until their relationships to one another are examined in context, including how those relationships may change across different tissues and over time.
Stubbs' team wanted to gather information that would allow them to construct this type of comprehensive gene network to reflect how the brain of a social animal responds to an aggressive encounter. They staged a controlled encounter between pairs of mice; one mouse in its home cage, and a second, unfamiliar mouse introduced behind a screen. The presence of the intruder mouse created a social challenge for the resident mouse, while the screen prevented a physical encounter.
The researchers then quantified the activity of genes in several different regions of the brain associated with social behaviorsthe frontal cortex, hypothalamus, and amygdalaand at several time points in the two hours following the encounter. In analyses of the resulting data, they looked for groups of genes acting together. In particular, they sought to identify transcription factors, genes whose protein products help control other genes, that might be orchestrating the brain's molecular response.
Stubbs was excited to discover that the results mirrored and expanded upon previous work in other species by collaborators at the IGB, including work by the laboratory of Director Gene Robinson in honey bees.
"As we examined the regulatory networks active in the mouse brain over time, we could see that some of the same pathways already explicated in honey bees... were also dysregulated similarly by social challenge in mice," she said. "That cross-species concordance is extremely exciting, and opens new doors to experimentation that is not being pursued actively by other research groups."
Among the genes responding to social challenge were many related to metabolism and neurochemical signaling. In general terms, it appeared that cells in the brains of challenged mice may alter the way they consume energy and communicate with one another, changes that could adjust the neural response to future social experiences.
The researchers looked for associations between genes' responses to social experience and their epigenetic state. How different regions of DNA are packaged into the cell (sometimes referred to as chromatin structure) can influence the activity of genes, and so-called epigenetic modifications, changes to this structure, help to modify that activity in different situations.
"We found that the chromatin landscape is profoundly remodeled over a very short time in the brain regions responding to social challenge," said Stubbs. "This is surprising because chromatin profiles are thought to be relatively stable in adult tissues over time." Because such changes are stable, they are sometimes hypothesized to reinforce long-term behavioral responses to experience.
Stubbs and her colleagues hope that by identifying genomic mechanisms of social behavior that are basic enough to be shared even between distantly related animal species, they can discover which biological mechanisms are most central.
"The most exciting thing in my view is using [comparisons between species] to drill through the complex response in a particular species to the 'core' conserved functions," she said, "thereby providing mechanistic hypotheses that we can follow by exploiting the power of genetic models like the mouse."
Explore further: Different species share a 'genetic toolkit' for behavioral traits, study finds
More information: Michael C. Saul et al, Transcriptional regulatory dynamics drive coordinated metabolic and neural response to social challenge in mice, Genome Research (2017). DOI: 10.1101/gr.214221.116
The house mouse, stickleback fish and honey bee appear to have little in common, but at the genetic level these creatures respond in strikingly similar ways to danger, researchers report. When any of these animals confronts ...
In the nucleus of eukaryotic cells, DNA is packaged with histone proteins into complexes known as chromatin, which are further compacted into chromosomes during cell division. Abnormalities in the structure of chromosomes ...
Scientists studying the role of a protein complex in the normal development of the mouse brain unexpectedly created a mouse model that replicates clinical symptoms of patients with complex neurological disorders such as hyperactivity, ...
It is almost axiomatic in medicine that the study of rare disorders informs the understanding of more common, widespread ailments. Researchers from the Perelman School of Medicine at the University of Pennsylvania who study ...
Heart disease kills more than 600,000 Americans every year, which translates to more than one in every four deaths. Although lifestyle choices contribute to the disease, genetics play a major role. This genetic facet has ...
Our DNA influences our ability to read a person's thoughts and emotions from looking at their eyes, suggests a new study published in the journal Molecular Psychiatry.
Mice have a reputation for timidity. Yet when confronted with an unfamiliar peer, a mouse may respond by rearing, chasing, grappling, and bitingand come away with altered sensitivity toward future potential threats.
Researchers at Queen's University have published new findings, providing a proof-of-concept use of genetic editing tools to treat genetic diseases. The study, published in Nature Scientific Reports, offers an important first ...
Yale scientists have discovered the cause of a disfiguring skin disorder and determined that a commonly used medication can help treat the condition.
Please sign in to add a comment. Registration is free, and takes less than a minute. Read more
See the original post here:
Social experience tweaks genome function to modify future behavior - Medical Xpress
- ENCODE: Encyclopedia Of DNA Elements - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 07.05.2010 - The Human Genome [ Coast To Coast AM ] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- NOVA scienceNOW : 51 - Public Genomes, Algae Fuel, Mystery of the Gakkel Ridge, Yoky Matsuoka - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Vincent T. - Genome (Club Remix) - [Preview] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Comparing The Human And Chimpanzee Genomes - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Whole Genome Sequencing and Its Impact on Clinical Care - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Carlos Bustamante -- "Reconstructing the Great Human Diasporas from Genome Variation Data" - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 3 Sad Surprises: The Human Genome Project - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The RFW interviews Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Science Bulletins: Scientists Peer Inside "Superbug" Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome : Live @ Smu's : June 3 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Inoki Genome Federation - Genome 19 - 04 02 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- THE HUMAN GENOME MUSIC PROJECT - CHROMOSOME 1 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genomic Medicine - Bruce Korf (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Human Genome's 'Blockbuster' Potential Undervalued in Bid GSK vs HGSI - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Announcing the Completion of the First Survey of the Entire Human Genome at the White House - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- DNA analysis Part I. Genomic Sequencing - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The Genome Question: Moore vs. Jevons with Bud Mishra - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome-Wide Association Studies - Karen Mohlke (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- New human genome research aids understanding of disease [Last Updated On: September 8th, 2012] [Originally Added On: September 8th, 2012]
- UNC Lineberger scientists lead definition of key lung cancer genome [Last Updated On: September 10th, 2012] [Originally Added On: September 10th, 2012]
- Illumina Announces Expedited Individual Genome Sequencing Service (IGS) [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Genome research given a boost with opening of bioscience facility [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Re-Imagining Our Genes: ENCODE Project Reveals Genome as an Information Processing System [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Illumina unveils upgraded genome sequence service [Last Updated On: September 12th, 2012] [Originally Added On: September 12th, 2012]
- US Personalized Cancer Genome Sequencing Market [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Yale maps “uncharted” genome regions [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Research and Markets: US Personalized Cancer Genome Sequencing Market [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- 3Qs: New clues to unlocking the genome [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- Oyster Genome Pries Open Mollusk Evolutionary Shell [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Bangladeshi scientist decodes genome of deadly fungus [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome uncover the stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- The oyster genome reveals stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Diseases of aging map to a few 'hotspots' on the human genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- GnuBIO Awarded $4.5 Million in Funding from the National Human Genome Research Institute to Develop Lower Cost Genome ... [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome mystery unravelled [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Devangshu Datta: What's in a genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Pacific Oyster Genome Shows Stress Adaptation And Complexity Of Shell Formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- UNC Lineberger scientists lead cancer genome analysis of breast cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Encoding the human genome [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Cancer genome analysis of breast cancer: Team identifies genetic causes and similarity to ovarian cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Fungus genome map paves way for 'Snow White' jute variety [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- New online, open access journal focuses on microbial genome announcements [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- By Simply Sharing, Doctors Could Unlock the Genome's Potential [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- Forget the Cloud—Knome Offers Genome Analysis in a Box [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- BGI@CHOP Joint Genome Center to Offer Clinical Next-Generation Sequencing Services [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- Holy Bat Virus! Genome Hints At Origin Of SARS-Like Virus [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- Community Fundraising Effort Helps Researchers Sequence Parrot Genome [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- UMass Med professors are sleuths of the genome [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- Knome Introduces the knoSYS™100; First Plug-and-Play Human Genome Interpretation System [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- First large scale trial of whole-genome cancer testing for clinical decision-making reported [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Should You Get Your Genome Mapped? [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Surprising differences between apples and pears [Last Updated On: October 2nd, 2012] [Originally Added On: October 2nd, 2012]
- 50-Hour Whole Genome Sequencing Provides Rapid Diagnosis for Children With Genetic Disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- A map of rice genome variation reveals the origin of cultivated rice [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome analysis promises hope for breast cancer patients [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome Alberta Welcomes Alberta Minister of Enterprise and Advanced Education, Stephen Khan and Federal Minister of ... [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Fifty-hour whole genome sequencing provides rapid diagnosis for children with genetic disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Will Low-Cost Genome Sequencing Open 'Pandora's Box'? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome testing could help individualize treatments [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Would you get your genome tested? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- The Genome — a Pandora's Box? [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- Fast genome test could help sick newborns [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- In-Depth Genome Analysis Moves Toward The Hospital Bed [Last Updated On: October 5th, 2012] [Originally Added On: October 5th, 2012]
- Your Verdict On Getting A Genome Test? Bring It On [Last Updated On: October 6th, 2012] [Originally Added On: October 6th, 2012]
- Genome-wide study identifies 8 new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome-wide study identifies eight new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome interpreter vies for place in clinical market [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- The $1,000 Genome: A Bait and Switch? [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- Mount Sinai School of Medicine Offers First-Ever Course with Whole Genome Sequencing [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- First whole genome sequencing of multiple pancreatic cancer patients has been outlined [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Cheap genome sequences demand new rules on privacy [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- UConn Gets Grant For Genome Research [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Inconsistent Genome Privacy Laws Need Toughening, Panel Says [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- US panel calls for stronger privacy for genome data [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- Genome Canada Board Appoints New Chair [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- The $1,000 Genome Is Almost Here- Are We Ready? [Last Updated On: October 15th, 2012] [Originally Added On: October 15th, 2012]
- Global genome effort seeks genetic roots of disease [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Massive encyclopedia helps explain how the human genome works [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Genome evolution and carbon dioxide dynamics [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]