Sign Up for
Our free email newsletters
Researchers are pushing forward on a project to one day create a synthetic genome of humans and other organisms, a development that could result in new ways to treat disease and even affect our fundamental understanding of human biology, yet also presents challenging ethical questions. At a recent scientific meeting, questions remained about how much should be shared with the public.
More than 200 prominent geneticists, biologists, technologists, and enthusiasts recently gathered in downtown Manhattan for a meeting of GP-write, a project with the goal to "understand the blueprint for life provided by the Human Genome Project."
The researchers plan to develop the scientific and technological tools necessary to synthesize genetic code inexpensively and efficiently. While the ease with which scientists can read DNA has sped up dramatically in the past 15 years, their ability to write it is much further behind. They can synthesize small bits of DNA, and even have created small viral and bacterial genomes from scratch, but eventually the goal is to tackle genomes of more complex microbes, plants, and even humans. Accomplishing this could give scientists cell lines for research and the production of biologic drugs, safer and innovative therapies to treat disease, microbes that could help nourish our bodies where food is scarce, or even complex data storage.
This was the second meeting of GP-write. Last year's meeting, held in Boston in May, drew controversy, mostly due to its opacity. Concerns about the ethics driving an advance as dramatic as a synthetic human genetic code, something that has the capacity to "completely redefine the core of what now joins all of humanity together as a species," as one researcher wrote, demand constant dialogue beyond the scientific community. But instead of inviting that conversation, the meeting appeared closed and secretive it was capped at 130 scientists with no members of the media present.
The meeting organizers say their hands were tied by scientific publishing rules an article outlining their work was going to be published in the journal Science, which does not allow researchers to discuss results publicly before publication (the article was published the following month). Media coverage of the meeting itself, however, contained a lot of hype and few facts, since the organizers couldn't talk to the press. However, GP-write's organizers did listen to public feedback generated from those articles, Nancy Kelley, the coordinator of GP-write, told Vocativ, and broadened the focus of the project beyond synthesizing human DNA.
Though they do plan to synthesize human DNA eventually, they realized that "the human part needed to be put off until the ethical implications were fully explored," Kelley said.
For this year's meeting, Kelley said, the project organizers wanted a more open meeting, and 22 reporters representing well-known magazines, newspapers, and web sites were on the list of attendees (I had recently reported on GP-write for CNBC). Some of the initial sessions were live streamed to hundreds of viewers, Kelley said. The overall vibe was congenial and collaborative.
But there was a caveat. The night before the meeting, members the media received an email that included a media policy. Because some of the presentations contain unpublished data, we were asked, as "a professional courtesy," to "refrain from sharing screen shots of the slide presentations and any scientific data shared at the meeting unless you have permission from the presenter" or "publishing any content without permission from the scientist in question." A bolded note to the same effect was inside the packet of materials handed to all attendees. The speakers were supposed to note on their slides whether the data was unpublished, Kelley said, but sometimes they forgot. Some people still took photos of slides, but the Twitter dialogue was relatively sparse.
For most researchers, the policy didn't seem strange. Several scientists and ethicists told Vocativ it's common to limit what can be shared at scientific meetings to promote openness within the scientific community because it allows researchers to discuss their unpublished work without violating journals' policies and without fear of others beating them to it.
The policy is in line with "standard norms of academic discourse at scientific conferences," Barbara Evans, the director of the University of Houston Law Center and one of the speakers who mentioned the importance of transparency in GP-write, told Vocativ via email. "It's a little counterintuitive, but true, that reasonable restrictions on communication can serve to promote transparency, if the restrictions encourage people to feel comfortable about sharing their original thoughts and ideas."
To others, however, the policy was less natural. There were many attendees who were not actively participating in research and might not have ever come to a scientific meeting, so they weren't used to the rule, especially because there was such little unpublished data presented. And, given the number of speakers who mentioned the importance of public interface and participation, the policy could even seem contradictory to some journalists.
"But despite opening their doors, [GP-write organizers] still have a ways to go to embrace transparency. The day before the meeting, a PR exec gave reporters new ground rules: No publishing content without permission from the scientist involved," reads Stat News' email newsletter sent before the meeting started.
One attendee named Bryan Bishop, whose interest in biology is strictly a hobby, took transcripts of the first of the talks and posted links to them on Twitter. He told Vocativ he was tapped on the shoulder by one of the meeting organizers and asked to stop. The following exchange happened on Twitter:
Bishop said he didn't know about the media policy and told Vocativ via email: "I think that everyone means well at GP-write. I don't feel offended they are still figuring how GP-write works and what's in their DNA I wasn't expecting a blanket 'don't post any content at all' especially after hearing the Center say kind words about the virtues of transparency and inclusiveness."
If anyone is restricting the transparency of the meeting, it's the scientific journals, said Eliza Strickland, a senior associate editor at engineering magazine IEEE Spectrum. "I fault these journals for wielding their power in an old-fashioned and outdated way that interferes with the free flow of scientific information, but I don't fault scientists or conference organizers for complying with their rules."
Journal policy or not, transparency has to be at the heart of GP-write, and last year's firestorm showed what can happen if it appears compromised. Jeffrey Bessen, a chemistry graduate student at Harvard who is on GP-write's public outreach committee, felt the media policy is justified, but says that he understands the "optics" of appearing as transparent as possible. "I think there's trust to be regained. That policy to me doesn't read like it's not transparent, but to someone else it might."
The project organizers know this and say they are committed to it. Various sessions at the two-day meeting were dedicated to ethical concerns and public outreach; a committee met to discuss how the organizers can best have an open conversation about their work. The dialogue will be ongoing, especially if the scientists get closer to synthesizing a human genome.
"We're going to continue to be as open as we possibly can," Kelley said.
This article originally appeared at Vocativ.com: Scientists working to build a human genome struggle with transparency.
See the original post:
If scientists build a synthetic human genome, does the public have a right to know? - The Week Magazine
- ENCODE: Encyclopedia Of DNA Elements - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 07.05.2010 - The Human Genome [ Coast To Coast AM ] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- NOVA scienceNOW : 51 - Public Genomes, Algae Fuel, Mystery of the Gakkel Ridge, Yoky Matsuoka - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Vincent T. - Genome (Club Remix) - [Preview] - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Comparing The Human And Chimpanzee Genomes - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Whole Genome Sequencing and Its Impact on Clinical Care - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Carlos Bustamante -- "Reconstructing the Great Human Diasporas from Genome Variation Data" - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- 3 Sad Surprises: The Human Genome Project - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The RFW interviews Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Science Bulletins: Scientists Peer Inside "Superbug" Genome - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome : Live @ Smu's : June 3 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Inoki Genome Federation - Genome 19 - 04 02 2012 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- THE HUMAN GENOME MUSIC PROJECT - CHROMOSOME 1 - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genomic Medicine - Bruce Korf (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Human Genome's 'Blockbuster' Potential Undervalued in Bid GSK vs HGSI - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Announcing the Completion of the First Survey of the Entire Human Genome at the White House - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- DNA analysis Part I. Genomic Sequencing - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- The Genome Question: Moore vs. Jevons with Bud Mishra - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- Genome-Wide Association Studies - Karen Mohlke (2012) - Video [Last Updated On: September 7th, 2012] [Originally Added On: September 7th, 2012]
- New human genome research aids understanding of disease [Last Updated On: September 8th, 2012] [Originally Added On: September 8th, 2012]
- UNC Lineberger scientists lead definition of key lung cancer genome [Last Updated On: September 10th, 2012] [Originally Added On: September 10th, 2012]
- Illumina Announces Expedited Individual Genome Sequencing Service (IGS) [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Genome research given a boost with opening of bioscience facility [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Re-Imagining Our Genes: ENCODE Project Reveals Genome as an Information Processing System [Last Updated On: September 11th, 2012] [Originally Added On: September 11th, 2012]
- Illumina unveils upgraded genome sequence service [Last Updated On: September 12th, 2012] [Originally Added On: September 12th, 2012]
- US Personalized Cancer Genome Sequencing Market [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Yale maps “uncharted” genome regions [Last Updated On: September 18th, 2012] [Originally Added On: September 18th, 2012]
- Research and Markets: US Personalized Cancer Genome Sequencing Market [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- 3Qs: New clues to unlocking the genome [Last Updated On: September 19th, 2012] [Originally Added On: September 19th, 2012]
- Oyster Genome Pries Open Mollusk Evolutionary Shell [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Bangladeshi scientist decodes genome of deadly fungus [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome uncover the stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- The oyster genome reveals stress adaptation and complexity of shell formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Diseases of aging map to a few 'hotspots' on the human genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- GnuBIO Awarded $4.5 Million in Funding from the National Human Genome Research Institute to Develop Lower Cost Genome ... [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Oyster genome mystery unravelled [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Devangshu Datta: What's in a genome [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- Pacific Oyster Genome Shows Stress Adaptation And Complexity Of Shell Formation [Last Updated On: September 20th, 2012] [Originally Added On: September 20th, 2012]
- UNC Lineberger scientists lead cancer genome analysis of breast cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Encoding the human genome [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Cancer genome analysis of breast cancer: Team identifies genetic causes and similarity to ovarian cancer [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- Fungus genome map paves way for 'Snow White' jute variety [Last Updated On: September 24th, 2012] [Originally Added On: September 24th, 2012]
- New online, open access journal focuses on microbial genome announcements [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- By Simply Sharing, Doctors Could Unlock the Genome's Potential [Last Updated On: September 25th, 2012] [Originally Added On: September 25th, 2012]
- Forget the Cloud—Knome Offers Genome Analysis in a Box [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- BGI@CHOP Joint Genome Center to Offer Clinical Next-Generation Sequencing Services [Last Updated On: September 28th, 2012] [Originally Added On: September 28th, 2012]
- Holy Bat Virus! Genome Hints At Origin Of SARS-Like Virus [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- Community Fundraising Effort Helps Researchers Sequence Parrot Genome [Last Updated On: September 29th, 2012] [Originally Added On: September 29th, 2012]
- UMass Med professors are sleuths of the genome [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- Knome Introduces the knoSYS™100; First Plug-and-Play Human Genome Interpretation System [Last Updated On: September 30th, 2012] [Originally Added On: September 30th, 2012]
- First large scale trial of whole-genome cancer testing for clinical decision-making reported [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Should You Get Your Genome Mapped? [Last Updated On: October 1st, 2012] [Originally Added On: October 1st, 2012]
- Surprising differences between apples and pears [Last Updated On: October 2nd, 2012] [Originally Added On: October 2nd, 2012]
- 50-Hour Whole Genome Sequencing Provides Rapid Diagnosis for Children With Genetic Disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- A map of rice genome variation reveals the origin of cultivated rice [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome analysis promises hope for breast cancer patients [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome Alberta Welcomes Alberta Minister of Enterprise and Advanced Education, Stephen Khan and Federal Minister of ... [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Fifty-hour whole genome sequencing provides rapid diagnosis for children with genetic disorders [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Will Low-Cost Genome Sequencing Open 'Pandora's Box'? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Genome testing could help individualize treatments [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- Would you get your genome tested? [Last Updated On: October 3rd, 2012] [Originally Added On: October 3rd, 2012]
- The Genome — a Pandora's Box? [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- Fast genome test could help sick newborns [Last Updated On: October 4th, 2012] [Originally Added On: October 4th, 2012]
- In-Depth Genome Analysis Moves Toward The Hospital Bed [Last Updated On: October 5th, 2012] [Originally Added On: October 5th, 2012]
- Your Verdict On Getting A Genome Test? Bring It On [Last Updated On: October 6th, 2012] [Originally Added On: October 6th, 2012]
- Genome-wide study identifies 8 new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome-wide study identifies eight new susceptibility loci for atopic dermatitis [Last Updated On: October 7th, 2012] [Originally Added On: October 7th, 2012]
- Genome interpreter vies for place in clinical market [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- The $1,000 Genome: A Bait and Switch? [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- Mount Sinai School of Medicine Offers First-Ever Course with Whole Genome Sequencing [Last Updated On: October 10th, 2012] [Originally Added On: October 10th, 2012]
- First whole genome sequencing of multiple pancreatic cancer patients has been outlined [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Cheap genome sequences demand new rules on privacy [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- UConn Gets Grant For Genome Research [Last Updated On: October 11th, 2012] [Originally Added On: October 11th, 2012]
- Inconsistent Genome Privacy Laws Need Toughening, Panel Says [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- US panel calls for stronger privacy for genome data [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- Genome Canada Board Appoints New Chair [Last Updated On: October 12th, 2012] [Originally Added On: October 12th, 2012]
- The $1,000 Genome Is Almost Here- Are We Ready? [Last Updated On: October 15th, 2012] [Originally Added On: October 15th, 2012]
- Global genome effort seeks genetic roots of disease [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Massive encyclopedia helps explain how the human genome works [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]
- Genome evolution and carbon dioxide dynamics [Last Updated On: October 31st, 2012] [Originally Added On: October 31st, 2012]