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Daily Archives: July 3, 2017
A New Hope For Depression: Part 1 – Boca Newspaper (press release) (blog)
Posted: July 3, 2017 at 8:22 am
By: Raul J. Rodriguez MD, DABPN, DABAM, MRO Special to the Boca and Delray newspapers
Treatment resistant depression is one of the most crippling and emotionally devastating conditions known to man. The loss of hope in ever recovering from a disease that does not respond to conventional treatment and has hopelessness as one of its symptoms can lead to a deadly downward spiral. Many good medications have been developed to treat Major Depression over the years, but sometimes the disease can be too severe and the medicine does not work. Some intensive treatments, such as ECT, are very effective but have severe side effects. This leaves many patients seeking a better solution. This dire need for a better solution led to the development of TMS.
So what exactly is TMS? TMS is the acronym for Transcranial Magnetic Stimulation, which is a cutting edge treatment for depression that involves stimulation of brain tissue using electromagnetic pulses. This noninvasive procedure improves symptoms of depression by activated the parts of the brain associated with mood control and depression. TMS has grown in popularity due to the high degree of effectiveness while having very few side effects and absolutely no circulation of medication in the bloodstream. The process starts with the placement of an electromagnetic coil over the scalp near the forehead. The motor strip, the area of the brain responsible for movement of limbs and muscles, is then mapped out. This is necessary in order to subsequently determine the location of the lateral pre-frontal cortex. The actual procedure involves a delivering a sequence of magnetic pulses to the left lateral pre-frontal cortex to induce stimulation. The magnetic pulses pass through the scalp and the skull to reach the target brain tissue. TMS activates the actual neurons by inducing an electrical current in the part of the brain cell called the axon. This current travels to the nerve cell body and then affects other connecting brain cells. This stimulation ultimately creates the powerful antidepressant effect. TMS is indicated when conventional treatments for Major Depression have not worked. TMS is also an option for individuals who suffer from Major Depression and do not wish to take medications. TMS was approved by the FDA for the indication of treatment resistant depression in 2008. Deep TMS, possible with the newer generation of TMS technology, was approved by the FDA for the indication of treatment resistant depression in 2013.
Deep TMS, also known as dTMS, refers to a more deeply penetrating form of TMS now possible using the newer generation of TMS technology produced by the Brainsway Corporation. Brainsway has engineered the H1 dTMS coil that was approved by the FDA for the indication of Treatment Resistant Depression. The H1 coil produces a magnetic pulse that stimulates a larger area than a traditional figure 8 coil. The stimulation also penetrates deeper, reaching 1.7 cm into the cortex. The benefits of this have to do with both a more complete stimulation of the target area as well as some stimulation of the neighboring areas of the brain that interconnect with the target area. The risk of dramatically losing efficacy from deviating even just 1mm from the target area is greatly diminished using a Brainsway device, as compared to a traditional figure 8 coil, due to the larger and deeper area of stimulation. The treatment session consists of 2,500 pulses delivered over a time span of approximately 20 minutes. This all helps yield higher rates of both response and remission of Treatment Resistant Depression.
Part 2 coming in August!
Dr. Rodriguez is the founder, CEO and Medical Director of the Delray Center For Brain Science, a true Brain Center which specializes in Treatment Resistant Depression, ADHD, OCD, Memory Disorders, and optimizing brain performance.
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Pirates notebook: Andrew McCutchen to keep CF job; Starling Marte says he made ‘a mistake’ – Tribune-Review
Posted: at 8:21 am
Updated 9 hours ago
Andrew McCutchen will remain the everyday center fielder even after Starling Marte rejoins the Pirates on July 18 after serving his suspension.
Manager Clint Hurdle revealed the decision Sunday, a day after he told McCutchen about it during a closed-door meeting.
On April 18, Marte was suspended 80 games by MLB for using steroids. On Sunday, he began a 15-day minor league rehab assignment with High-A Bradenton.
Marte is going to play left field and maybe (play) a game or two in center, in the minors, Hurdle said. Marte will come back (to the Pirates) as a left fielder.
Hurdle was asked if the move was made out of respect to McCutchen, who has enjoyed a renaissance at the plate and in the field during Marte's absence.
That's just where (Marte) needs to fit in, Hurdle said.
Last winter, Hurdle revamped the outfield alignment by moving Marte to center field and McCutchen to right. McCutchen reclaimed center when Marte was suspended.
We tried one thing, and it didn't work, McCutchen said. With everything that went on, it made it a little tougher to be able to do that. We have to go back to the drawing board, and now we're back to where we were in the past.
General manager Neal Huntington said McCutchen's defensive stats have improved over last season, when management forced him to play shallow in center.
His metrics are better this year, Huntington said. Part of that is we've pushed him back a little bit to play to his strengths and to his confidence, playing gap to gap.
After scuffling offensively in April and May, McCutchen batted .411 with six homers and a National League-leading 1.193 OPS in June.
Like I said a long time ago, I knew I was going to be better, McCutchen said. I expected to be better. And now I'm better. It's not a surprise for me. I just show up every day and get my work in. I don't think about anything else outside of where I hit in the order, where I play in the outfield. I'm just here and ready to play.
Marte's rehab plans
Before his first game with Bradenton, Marte spoke with media at LECOM Park. The Pirates provided an audio recording.
Marte said his suspension is the result of a mistake that I made, but did not get into specifics.
There's always something that can help, to move forward, always trying to be better, Marte said through a translator. But it's a mistake. I made that mistake. Now, I just want to move forward and help my team.
Later in the interview, Marte denied knowingly taking steroids and said the positive test result was a surprise to him.
It's not that anybody gave me anything, Marte said. It's something that I bought that might have induced this test positive. I was not aware that anything was in it.
Marte said he was told by MLB two weeks before the season began that he tested positive for Nandrolone, an anabolic steroid. That might account for his slow start Marte batted .241 in 13 games before his suspension was announced.
When you have issues and when you're thinking about something, it does impact the way your mind stays focused, Marte said. I'm not going to say 100 percent that my performance was impacted by that, but, at the time, I was worried. I had all of these things in the back of my mind.
Marte has played in several extended spring training games in addition to working out twice daily at Pirate City.
Conditioning-wise, he should be in a good spot, Huntington said. Baseball movement- and activity-wise, he should be in a good spot. It's now about speed of game.
Management wants Marte to play as many games as possible with Triple-A Indianapolis, starting sometime this week.
I anticipate him playing nine innings, full games, by the back half of next week, Hurdle said.
Cervelli on mend
Francisco Cervelli, who is on the disabled list recovering from a concussion, continues to do early work in the field. He has done some drills at shortstop, tutored by infield coach Joey Cora.
Cervelli will be back at catcher when he comes off the DL but might eventually be used at other positions. Cervelli has sustained at least eight head injuries while catching.
Although Huntington said changing roles is not a conversation we're having at this time, Hurdle indicated it could be mulled in the future.
He wants to ignite (off the DL) from behind the plate, Hurdle said. The next conversation can be, How can we look at some other options?'
There remains no timetable for when Cervelli will be activated.
We've told Francisco his return needs to be when he is healthy, confident and comfortable and not a day before that, Huntington said.
Dominican prospect signs
On the first day of the two-week international signing period, the Pirates came to terms with outfielder Juan Pie, 16, of the Dominican Republic. Pie got a $500,000 signing bonus.
A left-handed batter, Pie (6-foot-2, 170 pounds) has been rated by evaluators as having average speed and an average arm.
We love the bat, Huntington said. There is a frame for growth and additional strength, but, primarily, we liked the bat attributes.
Rob Biertempfel is a Tribune-Review staff writer. Reach him at rbiertempfel@tribweb.com or via Twitter @BiertempfelTrib.
Christopher Horner | Tribune-Review
Pirates fan Stephen Boyd takes a photo with center fielder Andrew McCutchen during Fanfest before Sunday's game against the Giants on July 2, 2017, at PNC Park.
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Local author under scrutiny for ties to eugenics – Bennington Banner (subscription)
Posted: at 8:19 am
ARLINGTON The eugenics movement is a dark chapter of Vermont's history, and now one local author's alleged role in that movement is under intense scrutiny.
Dorothy Canfield Fisher was a prolific local writer, and her namesake rests at various institutions in Arlington today including Fisher Elementary School. In 1957 a Vermont children's literacy program was established in the author's honor, and the Dorothy Canfield Fisher Book Award has recognized outstanding children's writers over the last 60 years.
Fisher's reputation has been questioned in recent weeks, as Essex educator and artist Judy Dow has led the fight for the removal of Fisher's name from the award. Dow, who has both French Canadian and Abenaki roots, claims that Fisher not only stereotyped French Canadians and Native Americans in her extensive works, but played an active role in the eugenics movement as well.
In an address to the Vermont Department of Libraries in April, Dow presented evidence of Fisher's ties to Vermont's eugenics movement and argued for the removal of Fisher's name from the award.
"The reason I started this was because our children are our most precious gift," said Dow. "To name an award for a children's book after someone who was a eugenicist is so wrong."
Now, the decision rests with State Librarian Scott Murphy, who will hear a recommendation from the Board of Libraries on July 11 and make a final decision thereafter.
"It's a touchy situation and it's really hard to look at these issues with our current morals and values and to judge history based on that," said Murphy. "I'm trying to get as much input as I possibly can from citizens before I make any decision; I have to be very careful to make sure we are taking the proper steps for Vermont."
A Multifaceted Identity
The allegations of Fisher's eugenicist entanglements stand in stark contrast to the author's identity as an accomplished female writer and social activist, promoting adult education programs and prison reform alongside her organization of World War I relief efforts. Fisher was honored as one of the 10 most influential women in the United States by former first lady Eleanor Roosevelt, a trailblazer in her own right.
Though Fisher made valuable contributions to society and literature, her ties to Vermont's eugenics movement raise questions. While some argue that her involvement was tangential, others claim that Fisher was more deeply involved.
The Vermont eugenics movement, led by University of Vermont Professor Henry F. Perkins, insisted upon the reality of a racial hierarchy in which "degenerate" classes of people including Vermont's French Canadian population, native peoples including the Abenaki, and African-Americans were doomed by heredity. These "degenerates," Perkins insisted, posed a threat to Vermont's way of life and cultural identity in an era when a declining population and economic stagnation topped the list of challenges faced by the state.
"She was a progressive, but it was the progressive party that was running the eugenics program," said Dow. "She was a product of the time, and the product of the time was eugenics."
The eugenics movement resulted in the creation of the Vermont Eugenics Survey, running from 1925 to 1936, as well as the formation of the affiliated Vermont Commission on Country Life (VCCL).
The VCCL was created by Perkins in 1928 to provide a comprehensive survey of the rural regions of the state, with the Eugenics Survey at "its center and core." Fisher was among the more than 70 individuals recruited to contribute to chapters of the organization's 1931 publication, "Rural Vermont: A Program for the Future." In this survey, contributors were charged with answering the question, "What is happening to the old Vermont Stock?"
Fisher was most heavily involved in VCCL's Committee on Tradition and Ideals, focusing heavily on increasing the number of tourists and second home owners in Vermont. In 1932, just one year after a sterilization law sponsored by Perkins and the Eugenics Survey was passed by Vermont's legislature (through which at least 250 "feeble minded" Vermonters were sterilized between 1933 and 1960, according to the Department of Health), Fisher accepted a position on VCCL's executive committee.
"It is not surprising that a writer from an earlier time might have beliefs and opinions that we now condemn," said State Rep. Cynthia Browning, D-Arlington. "This is not just evidence of prejudice: the possible connection to the eugenics movement that had unjust and tragic consequences is of concern."
Local Linkages
Many of Fisher's writings contain problematic racial stereotypes that may have been a byproduct of her era, though many of Dow's critics argue that authors should not be judged by their fictitious works. It is not certain that all of Fisher's representations are pure works of fiction, however.
"Dorothy Canfield Fisher's book "Bonfire" was based on a study the Eugenics Survey of Vermont did on Sandgate," said Dow. "You can go through the report and pull out the names, and match the names used in "Bonfire" to the names in the report."
A 1928 study by the Vermont Eugenics Survey titled "Key Families in Rural Vermont Towns," featured Sandgate as an example of "rural degeneracy." Indeed, many of the names mentioned in the "Town Gossip" section of the report can be found in Fisher's novel "Bonfire," which is set in a fictionalized Vermont town entrenched in poverty and populated primarily by French Canadians and "French Indians." In "Bonfire," residents of this community are depicted as "primitive," and "irresponsible sub-normals." At one point, a character is described as, "half-hound, half-hunter, all Injun."
Outside of her fictional works, Fisher was the author of a state tourism pamphlet produced by the VCCL which aimed to recruit "superior, interesting families of cultivation and good breeding." Additionally, in a 1941 commencement address, Fisher praised the residents of Manchester for taking in the nomadic Icy Palmer, a Tuscarora Indian abandoned at a local sugar house in 1924. Though her intentions seem valiant, Fisher denies in the address that Vermont was home to any measure of "ugly racial hatred and oppression," whilst insisting that no Native American populations ever found a true home in the state.
"I am, of course, deeply disturbed by the allegations concerning Dorothy Canfield Fisher. We always hope that those we honor have an honorable past, but almost always they do not," said Melissa Klick, a native Vermonter with both French Canadian and Abenaki heritage, and the owner of the Icy Palmer Candle Company. "Icy Palmer's funeral was not allowed to be held in a church, and she bowed to white people as they passed; she was assisted but not socially accepted by the Manchester community."
The Beginning of a Dialogue
While a heated debate rages on whether Fisher's name should remain on the book award, Murphy will ultimately rely on the feedback of Vermont's citizens and libraries to decide the issue.
"The whole point of this award is children's literacy, and if this name is going to deny a certain group of people that involvement then that's significant. There's somebody that's feeling pain, and I'm cognizant of that," said Murphy. "On the opposite side is the idea that judging history by today's point of view can be dangerous, and can sometimes do more harm than good."
Regardless, Fisher's complex history has opened the door for a meaningful dialogue on Vermont's troubling history with eugenics.
"I feel we must use historiography to keep examining our past to improve our understanding of the future," said Klik. "Let's move forward to make sure that the ignorance that shaped Canfield's prejudices no longer has a place in Vermont, nor any other corner of America."
"We change everything that's outdated as time goes on, so why wouldn't we change this if it's offensive?" said Dow. "It's time that the oppressor listens to the stories of those that were oppressed, and that's a good start.
More information on Vermont's Eugenics program can be found at http://www.uvm.edu/~eugenics/. The full report on Sandgate can be found at http://www.uvm.edu/~eugenics/primarydocs/ofkfssg090028.xml.
Reach Cherise Madigan at 802-490-6471.
If you'd like to leave a comment (or a tip or a question) about this story with the editors, please email us. We also welcome letters to the editor for publication; you can do that by filling out our letters form and submitting it to the newsroom.
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Don’t hand over your credit or debit card to waiters in Mumbai, some sell details for 1000 each – Hindustan Times
Posted: at 8:19 am
The investigation into a card cloning racket, unearthed by the Bandra police this month, has revealed that the racketeers allegedly paid Rs1,000 to each waiter for sharing details,including password, of each debit or credit card of customers.
The police last week arrested six waiters who worked at restaurants in Mumbai, Pune and Thane and two ITexperts. The waiter allegedly stole credit and debit card details of 1,028 customers. Officials said IT professionals had contacted the waiters through an acquaintance in the hotel management industry.
Pandit Thackeray, senior inspector of Bandra police station, confirmed that each waiter was paid Rs1,000 for each card.
By selling credit and debit card details, each waiter earned around Rs50,000 per month, according to an officer.
Thackeray added that the duped customers had accounts in 108 banks. The police have recovered 106 skimmers devices used to obtain card details from the eight men. The accused men made these devices from the scratch and uploaded the stolen data on empty cards. The accused then withdrew money from the customers account using these cloned cards. The waiters in the beginning copied details of one or two card. As they grew confident, they began cloning 40 to 50 cards in a month, added the police officer.
Three of these waiters worked at a restaurant at Sakinaka in Andheri (East). The unsuspecting customers handed over their cards and pin code to the waiters who secretly swiped them on the skimmers. In some cases, they clandestinely saw customers punching in card pin code on the swipe machine.
The Bandra police received a complaint from Citi Bank in May which led to the racket. Apart from the 106 skimmers, the police seized a laptop and a unique software used to clone cards. The police have also seized 50 cloned cards from the accused which are rewritable.
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Centennial: The evolution of friendly, efficient Hoffmann Automotive – Davis Enterprise
Posted: at 8:18 am
Hoffmann 76 was the last downtown service station standing when its owners decided it was time to shift gears.
So successful was the repair and maintenance aspect of Jeff and Rick Hoffmanns business, they often couldnt find enough space to queue the cars to which they wereattending.
In 2005, the brothers sold their property at Fifth and G streets, moving to new digs at 2613Second St. where Hoffmann Automotive was born.
The business legacy began in the 1970s when Davis High graduates Jeff and Rick worked at what once was known as Ray Moss Union.
I was working nights, my wife was at the university days and we never really saw each other, recalls Jeff, who with wife Susan was expecting the birth of son Jason.
Then in 1979, Jeff had an opportunity to buy the place from Ray, explains Rick, who had served six years in the National Guard and hadnt worked at Moss when his brother did.
No escrow, nothing like that, Jeff says. I just wrote Ray a check at the dinner table and it was done. It was a different time.
That was 1979. The Union 76 folks had a mandate called Minuteman Service.
(Union) was really, really big on customer service, customer focus and we believed it, too, Rick says.
We knew how to treat people, or we thought we did: Treat them the way youd want to be treated, Jeff explains. I didnt know (anything) about being in business for myself. I just knew I liked cars and I had the opportunity to buy this gas station.
Rick concurs: We just did (business) the common-sense way. We were nice to people, we did things other places didnt do.
Remember getting your oil checked, windows washed, tire pressure topped off? Long time ago, but
To this day, that lets-get-it-right approach remains evident at Hoffmann Automotive.
Nine employees, including Jeffs wife and son Jason, are on staff.
The elements that 26-year-old Jeff Hoffmann embraced when he took over as one of the youngest 76 dealers in America are stillin place.
Its pretty simple, Rick adds.
Oh, and about that policy of being nice to customers?
Rick Hoffmann met his wife Diane the gas station
She kept coming in kept dropping hints and dropping hints. She kept trying to ask me out, but I was oblivious to all this, he remembers.
We had a rule: we were nice to everybody and waited on customers, right? We kept work and play separate.
Finally, Diane had to ask Mr. Nice Guy out.
hoffman old W
Bob Isaacs aims to get a hole-in-one in this June 1979 photo to promote a Kiwanis golf tournament. Jeff Hoffmann shows off the tires to be given to the best golfer. Enterprise file photo
hoffman aerialW
An aerial photo shows the site of the Hoffmanns Union 76 station at Fifth and G streets in downtown Davis. Courtesy photo
HoffmannNewW
Rick Hoffmann, left, and his brother Jeff have owned Hoffmann Automotive since 1979. They moved their business from Fifth and G streets where they owned a Union 76 station for 26 years to 2613 Second St. in 2005. Sue Cockrell/Enterprise photo
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How flu changes within human body may hint at evolution of global trends – Business Standard
Posted: at 8:18 am
Evolution is usually very slow, a process of change that takes thousands or millions of years to see.
But for influenza, evolution is fast and deadly. Flu viruses change rapidly to escape the bodys defences. Every few years, new variants of flu emerge and cause epidemics around the world.
Controlling the spread of flu means dealing with this ongoing evolution. Each year, experts from the World Health Organization (WHO) must make their best guess about how the virus will change in order to choose which flu strains to include in the annual vaccine.
This work is difficult and uncertain, and mistakes have real consequences. Worldwide, flu infects several million people each year and causes hundreds of thousands of deaths. In years when predictions miss the mark and the flu shot is very different from circulating strains, more people are vulnerable to infection.
In the past several years, advances in genome sequencing have begun to shed light on the beginnings of viral evolution, deep within individual infections. We wondered whether, for flu, this information might give us an early glimpse of future global evolutionary trends.
What could a single persons flu infection tell us about how the virus changes across the world? As it turns out, a surprising amount.
Looking deep inside an infection
Every step in flus evolution begins with a mistake. As viruses copy themselves within an infected person, they sometimes mutate, creating small changes to their genetic blueprint.
Most mutations are harmful to the virus because they break the machinery it needs to function. But every so often, a mutant virus survives, and even thrives. Viruses play a constant game of cat-and-mouse with the human immune system. Sometimes, a mutant virus may be just different enough to escape the bodys notice.
A mutant virus with this kind of advantage can multiply quickly and come to dominate the infection. Eventually, it may even spread from person to person, and from there, start spreading around the world.
Recently, its become easier to track how viruses change within the human body. The same advances that have made it cheap and easy to sequence human genomes are changing how we study viruses. For the cost of sequencing a single human genome, we can sequence thousands of viruses from throughout an infection to track new mutations as they arise.
These mutations can show us how the virus reacts to challenging environments within the human body. For HIV, where infections often last years or even decades, evolution can be substantial, even within a single person. In particular, viruses often evolve drug resistance in response to antiviral treatment.
Tracking flu evolution in four long infections
We recently tracked viral evolution in four cancer patients who had flu infections lasting several months. Most flu infections last about a week, which limits the amount of change that can occur. But in patients with weak immune systems, infections can last a long time, with severe effects.
How did flu change within these long infections? By sequencing viruses from different times during the infection and comparing their genomes, we were able to identify new mutations and track their fates.
Each subplot represents one site in the virus where mutations can occur. Mutant viruses are shown in orange, and their frequencies rise and fall over time. Xue et al. eLife 2017;6:e26875, CC BY
Evolution acted in a matter of weeks. One clear example was resistance to Tamiflu. The patients we studied were taking the drug to control their infections. But, as in prior studies, viruses carrying drug-resistance mutations eventually emerged. These mutations might partly explain why the infections lasted so long.
Drug-resistance mutations werent the only evolutionary changes we saw. Half a dozen mutant viruses, all just slightly different from one another, would sometimes compete simultaneously in a single person.
These competing viruses made evolution a complicated affair. A mutation that started spreading one week would sometimes go extinct the next. Presumably, it was outcompeted by an even better mutation.
In some cases, we found the exact same mutations in viruses from different patients in our study, even though we could tell that the patients did not infect each other. Wed only very rarely expect such similarities to happen due to chance. The viruses may have hit on similar adaptations in response to evolutionary challenges. Some of these mutations may have helped the virus avoid the immune system, echoing other studies.
Whats more, many mutations within these patients matched mutations that later spread around the world. In the spikes of flus outer coat, which help the virus enter host cells, the mutation N225D emerged in three of the four patients in our study. By 2015, about eight years after our patients were infected, most flu viruses around the world carried the exact same change.
For us, this was unexpected. Evolution is full of trade-offs, and some mutations that help flu adapt within people may slow its transmission from person to person. We also didnt know whether evolution in such unusually long flu infections would match patterns of change around the world.
But in our study, flu evolution in individual people showed striking similarities to evolution around the globe. We could see hints of some global evolutionary trends within just a few individuals.
As technologies continue to improve, its becoming easier to look deep inside flu infections, like we did. WHO labs sequence flu strains from thousands of people every year to monitor flu evolution. Researchers are sequencing more and more strains in ways that let us catch mutations as they first arise within individual people.
Each of these thousands of infections is like a separate evolutionary experiment. By comparing mutations that appear in different infections, we may get a sense of evolutionary possibilities and constraints.
Somewhere down the line, this kind of information may help forecast flus evolution. For now, at least, its uncovering some of the dynamic processes of evolution that take place within each of us.
Katherine Xue, Doctoral Student in Genome Sciences, University of Washington and Jesse Bloom, Associate Member, Fred Hutchinson Cancer Research Center and Affiliate Associate Professor of Genome Sciences and Microbiology, University of Washington
This article was originally published on The Conversation. Read the original article.
Evolution is usually very slow, a process of change that takes thousands or millions of years to see.
But for influenza, evolution is fast and deadly. Flu viruses change rapidly to escape the bodys defences. Every few years, new variants of flu emerge and cause epidemics around the world.
Controlling the spread of flu means dealing with this ongoing evolution. Each year, experts from the World Health Organization (WHO) must make their best guess about how the virus will change in order to choose which flu strains to include in the annual vaccine.
This work is difficult and uncertain, and mistakes have real consequences. Worldwide, flu infects several million people each year and causes hundreds of thousands of deaths. In years when predictions miss the mark and the flu shot is very different from circulating strains, more people are vulnerable to infection.
In the past several years, advances in genome sequencing have begun to shed light on the beginnings of viral evolution, deep within individual infections. We wondered whether, for flu, this information might give us an early glimpse of future global evolutionary trends.
What could a single persons flu infection tell us about how the virus changes across the world? As it turns out, a surprising amount.
Looking deep inside an infection
Every step in flus evolution begins with a mistake. As viruses copy themselves within an infected person, they sometimes mutate, creating small changes to their genetic blueprint.
Most mutations are harmful to the virus because they break the machinery it needs to function. But every so often, a mutant virus survives, and even thrives. Viruses play a constant game of cat-and-mouse with the human immune system. Sometimes, a mutant virus may be just different enough to escape the bodys notice.
A mutant virus with this kind of advantage can multiply quickly and come to dominate the infection. Eventually, it may even spread from person to person, and from there, start spreading around the world.
Recently, its become easier to track how viruses change within the human body. The same advances that have made it cheap and easy to sequence human genomes are changing how we study viruses. For the cost of sequencing a single human genome, we can sequence thousands of viruses from throughout an infection to track new mutations as they arise.
These mutations can show us how the virus reacts to challenging environments within the human body. For HIV, where infections often last years or even decades, evolution can be substantial, even within a single person. In particular, viruses often evolve drug resistance in response to antiviral treatment.
Tracking flu evolution in four long infections
We recently tracked viral evolution in four cancer patients who had flu infections lasting several months. Most flu infections last about a week, which limits the amount of change that can occur. But in patients with weak immune systems, infections can last a long time, with severe effects.
How did flu change within these long infections? By sequencing viruses from different times during the infection and comparing their genomes, we were able to identify new mutations and track their fates.
Each subplot represents one site in the virus where mutations can occur. Mutant viruses are shown in orange, and their frequencies rise and fall over time. Xue et al. eLife 2017;6:e26875, CC BY
Evolution acted in a matter of weeks. One clear example was resistance to Tamiflu. The patients we studied were taking the drug to control their infections. But, as in prior studies, viruses carrying drug-resistance mutations eventually emerged. These mutations might partly explain why the infections lasted so long.
Drug-resistance mutations werent the only evolutionary changes we saw. Half a dozen mutant viruses, all just slightly different from one another, would sometimes compete simultaneously in a single person.
These competing viruses made evolution a complicated affair. A mutation that started spreading one week would sometimes go extinct the next. Presumably, it was outcompeted by an even better mutation.
In some cases, we found the exact same mutations in viruses from different patients in our study, even though we could tell that the patients did not infect each other. Wed only very rarely expect such similarities to happen due to chance. The viruses may have hit on similar adaptations in response to evolutionary challenges. Some of these mutations may have helped the virus avoid the immune system, echoing other studies.
Whats more, many mutations within these patients matched mutations that later spread around the world. In the spikes of flus outer coat, which help the virus enter host cells, the mutation N225D emerged in three of the four patients in our study. By 2015, about eight years after our patients were infected, most flu viruses around the world carried the exact same change.
For us, this was unexpected. Evolution is full of trade-offs, and some mutations that help flu adapt within people may slow its transmission from person to person. We also didnt know whether evolution in such unusually long flu infections would match patterns of change around the world.
But in our study, flu evolution in individual people showed striking similarities to evolution around the globe. We could see hints of some global evolutionary trends within just a few individuals.
As technologies continue to improve, its becoming easier to look deep inside flu infections, like we did. WHO labs sequence flu strains from thousands of people every year to monitor flu evolution. Researchers are sequencing more and more strains in ways that let us catch mutations as they first arise within individual people.
Each of these thousands of infections is like a separate evolutionary experiment. By comparing mutations that appear in different infections, we may get a sense of evolutionary possibilities and constraints.
Somewhere down the line, this kind of information may help forecast flus evolution. For now, at least, its uncovering some of the dynamic processes of evolution that take place within each of us.
Katherine Xue, Doctoral Student in Genome Sciences, University of Washington and Jesse Bloom, Associate Member, Fred Hutchinson Cancer Research Center and Affiliate Associate Professor of Genome Sciences and Microbiology, University of Washington
This article was originally published on The Conversation. Read the original article.
Katherine Xue, Jesse Bloom | The Conversation
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Erdogan vs. Darwin: Turkey will pay the price for removing evolution … – Newsweek
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This article was originally published on The Conversation. Read the original article.
In the US there have been many attempts to expunge evolution from the school curriculm or demand that creationismthe idea that all life was uniquely created by Godis given equal treatment in science textbooks. While all these have failed, the government in Turkey has now banned evolution from its national curriculum.
US creationists want both views to be presented, to let children decide what to believe. Bids to reject this are wrongly characterized as attempts to shut down debate or free speechto promote a scientific, atheistic, secular, ideology over a more moral, ethical, commonsense religious worldview.
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Turkeys decision goes much further. This isnt about claiming equal treatment, its an outright ban. The government justifies it by claiming evolution is difficult to understand and controversial. Any controversy however is one manufactured by ultra-religious communities seeking to undermine science. Many concepts in science are more difficult than evolution, yet they still get taught.
Evolution, creationists argue, is just a theory its not proven and so up for debate. Evolutionary trees (especially for humans) are regularly re-drawn after new fossil discoveries, showing how poor the theory is. After all, if the theory was correct, this wouldnt keep changing. Often, creationists will pose a challenge for science to prove how life started, knowing that there is not yet a firm, accepted theory. Finally, theres the king of all arguments: if we all evolved from monkeys, why are there still monkeys?
These arguments are packed with factual inaccuracies and logical fallacies. Evolution doesnt need an explanation of how life started. It simply describes how life develops and diversifies. Humans did not evolve from monkeyswere great apes. Modern apes, including humans, evolved from now extinct pre-existing ape species. Were related to, not descended from, modern apes.
Creationists fail to understand that evolution itself is not a theory. Evolution happens. Life develops and diversifies, new species come into existence. We can see intermediate life forms right now, such as fish that are transitioning to living on land and land mammals that recently transitioned into aquatic life. The theory of evolution explains how evolution takes place. Charles Darwin and Alfred Russel Wallace first described the mechanism that drives the changenatural selectionin 1858.
Creationists also fail to understand the difference between a theory and a law in science. This is something that even science graduates suffer from, as Ive noted in my own research. Theories explain scientific concepts. They are evidenced and accepted by the scientific community. Theories are the pinnacle of scientific explanation, not just a hunch or a guess. Laws however have a different role, they describe natural phenomena. For example, Newtons laws of gravity do not explain how gravity happens, they describe the effects gravity has on objects. There are laws and theories for gravity. In biology however, there are few laws, so there is no law of evolution. Theories do not, given sufficient proof, become laws. They are not hierarchical.
A third issue is the lack of understanding of the nature of science. Science aims not to find some objective truth, but to elicit an explanation of natural phenomena. All scientific explanations are provisional. When new evidence is found that contradicts what we think we know, we change our explanations, sometimes rejecting theories that were once thought to be correct. Science is always working to try and falsify ideas. The more those ideas pass our tests, the more robust they are and the greater our confidence is that they are correct. Evolution has been tested for nearly 160 years. Its never been falsified. Science only deals with natural phenomena, it doesnt deal with or seek to explain the supernatural.
Banning good science undermines all science, especially considering evolutions place underpinning modern biology, with plenty of evidence to support it. For mainstream scientists, the fact that evolution happens is neither seriously questioned nor controversial. Any controversy in discussions of evolution resides in the role natural selection has in driving diversity and change, or the pace of that change.
This ban on teaching evolution in Turkish schools opens up the possibility that alternative, unscientific ideas may enter science teaching, from those who believe in a flat earth to deniers of gravity.
How do we deal with the apparent schism between religious belief and scientific evidence?
My research and approach has been to distinguish between religion, a belief system, and science, which works on the acceptance of evidence. Beliefs, including but not limited to religious beliefs, are often held irrationally, without evidence, and are resistant to change. Science is rational, based on evidence and is open to change when faced with new evidence. In science, we accept the evidence, rather than choose to believe.
Turkeys move to ban the teaching of evolution contradicts scientific thinking, and tries to turn the scientific method into a belief systemas if it were a religion. It seeks to introduce supernatural explanations for natural phenomena, and to assert that some form of truth or explanation for nature exists beyond nature. The ban is unscientific, undemocratic and should be resisted.
James WilliamsisLecturer in Science Education attheSussex School of Education and Social Work, University of Sussex.
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Arsenal: 52 million Alexandre Lacazette signals change and evolution – Pain In The Arsenal
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LISBON, PORTUGAL - JULY 23: Lyon's forward Alexandre Lacazette celebrates scoring Lyons goal during the Friendly match between Sporting CP and Lyon at Estadio Jose Alvalade on July 23, 2016 in Lisbon, Portugal. (Photo by Carlos Rodrigues/Getty Images)
Arsenal: Alexandre Lacazette the last nail in Kylian Mbappe coffin by Andrew Dowdeswell
Arsenal: Riyad Mahrez the perfect Alexandre Lacazette sequel by Andrew Dowdeswell
Alexandre Lacazette is seemingly set to sign for Arsenal. The Lyon striker has arrived in North London for a medical, ahead of completing a 52-million move. It is an extremely exciting move that is the type of high-profile signing that fans have been pining for. But there is much more to this addition than meets the surface.
To provide a little context for the impending signing of Lacazette, we must travel back to last summer. In very similar circumstances, Arsene Wenger was searching for a replacement for Olivier Giroud. But it is not a simple like for like replacement that Wenger is wanting to find.
In his quest to find an alternative striking option, Wenger was looking for a very particular type of player: a pacy, dynamic, direct centre-forward who can run the channels, stretch defences with their quickness and sharpness, and create space for the plethora of creative, ingenious attacking midfielders behind them as a result.
That is most definitely not the player that Giroud is. That is not to say that he is a bad player. He has a unique set of skills that few others in European football can replicate. His strength and size cause problems for opposing defences, while he boasts an excellent first touch with great awareness, meaning he is the perfect focal point with his back to goal, excelling in the neat interplay that Wenger demands of his teams.
Lacazette arriving is a sign that Wenger is wanting to alter his tactics.
There is a change and an evolution coming to the Arsenal. But there is more than just an alteration on the pitch that the addition of Lacazette eludes to.
His signing is also very different to that of the usual Arsenal transfer dealings. He will break the clubs record fee for a player, he is a big-name, high-profile star who has been pursued by several other sides, and will be added to the squad early in the window, showing a convictionand intention in the transfer window that is usually criticised for being so painfully absent.
The transfer is an exciting one, one that brings an element of optimism and hopefulness to the future. But it is also one that signals a changing of the times at the Emirates, and that is perhaps the most promising element of all.
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Florida residents can now challenge how climate change, evolution are taught in school – Mashable
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Mashable | Florida residents can now challenge how climate change, evolution are taught in school Mashable Now in Florida, residents could possibly do the same with textbooks about the science behind climate change and evolution. Last week, Republican Gov. Rick Scott signed legislation that makes it easier for any Florida resident to object to classroom ... New Florida law lets any resident challenge what's taught in science classes |
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Burning Man exhibit documents evolution of Nevada event – Honolulu Star-Advertiser
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Briefs| Travel
By Star-Advertiser News Services
Posted July 02, 2017
July 2, 2017
Updated July 2, 2017 12:05am
ASSOCIATED PRESS / 2007
A stilt walker cruised the playa during the Burning Man festival in Gerlach, Nev. The festival is featured in an exhibit at the Nevada Museum of Arts.
RENO, Nev. >> The City of Dust exhibit is on display at the Nevada Museum of Arts in Reno.
The Reno Gazette-Journal reports the exhibit, which traces the more than three-decade evolution of Burning Man, opened to the public Saturday.
Burning Man is an annual event that started as a bohemian beach gathering in San Francisco in 1986 and has morphed into a modern-day pop-up city in Nevadas Black Rock Desert.
More than 68,000 people flock to the desert each year to form a temporary metropolis dedicated to community, art, music, self-expression and self-reliance.
The 300-piece collection of Burning Man relics will remain open until Jan. 7.
After the exhibition in Reno, it will travel to the Renwick Gallery of the Smithsonian American Art Museum in Washington, D.C., in spring 2018.
This years Burning Man gathering is scheduled for Aug. 27 to Sept. 4.
Genoa creates special airport waiver for famed pesto sauce
ROME >> The Italian port city of Genoa has taken pride in its famed pesto sauce to new heights by granting special airport waivers for those who cant get enough of the basil and pine nut pasta sauce.
Genoas airport is letting travelers take as much as 500 grams of pesto (about 2 cups) in their carry-on luggage, exempting them from the 100-milliliter rule (about 6 tablespoons) for liquids in carry-on baggage. The catch: Passengers must make a donation of 50 cents or more to a charity that airlifts sick children to hospitals.
The airport said in a statement this week that some 500 euros (about $558) had been raised in the first 20 days of the initiative, which was inspired by the anguish of having to confiscate so many jars of pesto from foodies trying to get them through security.
thefamilybackpack.com
If mother knows best, why not turn to a whole lot of moms and dads for help in planning your next family adventure?
>> Name: thefamilybackpack.com
>> What it does: The easy-to-use website curates the best of family travel blogs for tips, advice, information and inspiration.
>> Whats hot: The website is not just about where to go; it is also stocked with important articles about allergies, vaccinations, bedbugs and illness. The site is particularly good for new parents and families who have not traveled a lot with young kids. Find articles such as Six Tips for Surviving Airline Travel With a Baby (The Wandering Daughter) and Flying With an Infant: Long-Haul (Babies Who Travel). The tips section aims to relieve stress with articles such as How to Get Your Kids More Excited About Vacation (Stuffed Suitcase) and Advice From Seven Years of Traveling With My Kids (This Is My Happiness). Dont miss the Educational Resources section for activities and games, photography tips, printables and more.
>> Whats not: The Destination section is divided into North America, Africa, Asia, Europe, South America and Oceania. There are plenty of posts within each, but the section could benefit from a city directory or a map of articles within.
Jen Leo, Los Angeles Times
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