Daily Archives: February 6, 2017

Saving the flavors of centuries: against Flavr Savr and the genetic engineering of taste – Slow food

Posted: February 6, 2017 at 2:49 pm

Several years ago, in its Retro Report section, the New York Times posted an old video about the genetically modified Flavr Savr tomato, which was developed by Calgene and launched on to the market in 1994 only to be withdrawn a few years later. The video includes clips of a television program from the time. An intrigued woman is shown two tomatoes picked 30 days earlier, neither of which has been refrigerated. The first tomato is perfect: round, bright red and with no signs of softening. The second has wrinkly skin and a dulled color, clearly rotten. The perfect tomato is a Flavr Savr, engineered to maintain the texture, juiciness and color of a freshly picked tomato for longer. However, despite its apparent perfection and characteristics which, from a commercial point of view, should have certainly made it a success, the Flavr Savr vanished not long after it appeared. Why? Because it was missing the one feature more important than any other: flavor.

Fast forward to today, and the latest cover of Science magazine features Tastier Tomatoes, which hints at the research being conducted by a large group of scientists to design a truly perfect tomato with the texture, juiciness and color of a freshly picked tomato, and indeed, the flavor of heirloom tomato varieties.

The premise of the study is that modern commercial tomato varieties are substantially less flavorful than heirloom varieties. Over time, agricultural research has focused on improving the characteristics that determine whether different varieties are commercially successful: yield, disease resistance and firmness. All at the expense of flavor. Often, the tomatoes we buy taste of nothing. They seem like fake fruit, all too perfect to look at, but flavorless. To fix this fault, the team of scientists have studied the characteristics that most affect the flavor of the product, sequencing the whole genome of 398 modern, heirloom and wild varieties. They then selected 160 tomato samples from 100 varieties and grew them in the laboratory, harvested them and submitted them to extensive taste testing by 100 people. The participants voted for the tomatoes based on flavor and, by comparing this information with their genetic analyses, the scientists determined which genes were associated with flavors that the public enjoyed.

Is a new future taking shape for a fruit that the FAO considers to be one of the most high-value in the world? Maybe. A laboratory-made future, completely removed from the land and restricted by private patents, like all genetically modified products. Slow Food on the other hand, supports a different kind of research, namely what farmers have been doing for around 10,000 years: selecting seeds, conserving them, propagating them and developing varieties suited to different soils and climates, based on traditional knowledge. Work that, over centuries, improves the yield, flavor and nutritional value of crops, without compromising biodiversity and, on the contrary, gradually enriching it.

Examples of these crops are cataloged in the Ark of Taste and among Slow Food Presidia: the Platense tomato from Argentina which, despite its far superior flavor compared with commercial tomatoes, has to deal with intense competition from high-yield hybrid varieties that can be produced all year round; the Smooth Skin Geraldton tomato from Australia, which is suffering due to the appearance of greenhouses in Melbourne and Adelaide which enable tomato production all year round; Kurtovo Konare pink tomatoes, whose survival is under threat from foreign varieties with higher yields that are more suited to being transported; and the Torre Canne Regina tomato, grown without irrigation using organic methods in Apulia, which faces almost unbeatable commercial competition from greenhouse-grown cherry tomatoes. We could mention dozens of other such examples of tomatoes that farmers have developed over centuries through careful selection, rather than artificially engineered in the laboratory. And we would prefer a future where the value of naturally flavorful tomatoes is appreciated once more.

Images: Science Magazine, Western Gardens

First offical Slow Food conference in Iran

Slow Food rememebers Predrag Matvejevic

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Saving the flavors of centuries: against Flavr Savr and the genetic engineering of taste - Slow food

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Why You Are Short (Or Tall): Human Genetics, Explained – Medical Daily

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If you feel youre too short or too tall you can blame your genes. And it looks like theres plenty of blame to go around.

A study in Naturehas identified dozens of infrequently occurring genetic variants that are associated with human height to a moderate or large degree, some of them carrying an influence of up to 2 centimeters (more than of an inch). A number of the DNA elements are tied to genes already known to affect growth, such as those affecting bones and hormones, but others represent new processes involved in growth and height. That latter group could potentially lead scientists to new treatments for growth disorders.

Read: Technology To Change Genes Could End Tuberculosis

In the context of precision medicine, the results also bring hope to understand the genetic basis of complex diseases such as diabetes or schizophrenia, according to the Swiss Institute of Bioinformatics. The idea is that if we can understand the genetics of a simple human trait like height, we could then apply this knowledge to develop tools to predict complex human diseases, researcher Zoltn Kutalik said in the institutes statement.

According to SIB, the research relied on the international effort of more than 300 scientists and pulled DNA data from more than 700,000 people.

Your body might contain genes that can add up to 2 centimeters to your height. Pixabay, public domain

While previous research has fingered hundreds of genetic variants for playing a role in height, the Nature study notes that those variants are much more common, butplay only a marginal role in a persons measurement. The newly discovered variants have greater than 10 times the average effect of common variants.

While DNA plays the biggest role in how tall we are, our diet and our environment also influence how we measure up. For instance, Scientific Americannotes that protein is the most important nutrient for final height. Minerals such as calcium, vitamin A and vitamin D are also significant. Because of this, malnutrition in childhood is detrimental to height.

Source: Marouli E, Graff M, Medina-Gomez C, et al. Rare and low-frequency coding variants alter human adult height. Nature. 2017.

See also:

Genes Tell Us Whether Youll Drop Out of School

How a Blood Transfusion Changes Your DNA

How Evolution Will Change Our Bodies

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Why You Are Short (Or Tall): Human Genetics, Explained - Medical Daily

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Tom Brady, ‘super human’? How genetics may contribute to his … – Genetic Literacy Project

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[NFL quarterback Tom Bradys] age-39 season was statistically among the best of his 17-year career with the New England PatriotsWhats maybe most remarkable about his 2016 performance is that it came at an age by which many other luminaries of the positionhad already retired.

Bradys DNA does enable him to be bigger and faster and stronger than many of usBut its not one or even a few dozen specific genes that help him with that. Instead, hundreds, if not thousands, of genesdetermine features like body compositionSimply put, Brady likely doesnt have a superhuman mutation tucked into his genetic code.

Some scientists are focused on studying the connection between genes and injury risk, while others think that perhaps the intense training elite athletes go through can kick dormant genes into high gear. Certain types of training seem to activate genes that everyone has that will change muscular structure, even blood vessels, said K. Anders Ericsson, a psychology professor at Florida State University. Theres even compelling evidence that the heart will adapt to these kind of training conditions.

Its also possible that Bradys genetics could explain in part why he has been able to play nearly into his fifth decade. Just as a healthy lifestyle can keep ones fitness age below biological age, some experts believe people have internal aging clocks that tick away at different speeds.

The GLP aggregated and excerpted this blog/article to reflect the diversity of news, opinion, and analysis. Read full, original post:Tom Brady: Ageless wonder

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Research finds strategy that may treat juvenile Batten disease – Baylor College of Medicine News (press release)

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Testing a treatment for juvenile Batten disease in a mouse model of the condition

The scientists tested the effect of trehalose in a mouse model of juvenile Batten disease.

We dissolved trehalose in drinking water and gave it to mice that model juvenile Batten disease, said Sardiello. Then, over time we examined the mices brain cells under the microscope. We found that the continuous administration of trehalose inhibits Akt and activates TFEB in the brains of the mice. More active TFEB meant more lysosomes in the brain and increased lysosomal activity, followed by decreased accumulation of the storage material and reduced tissue inflammation, which is one of the main features of this disease in people, and reduced neurodegeneration. These changes resulted in the mice living significantly longer. This is a good start toward finding a treatment for people with this disease.

We are very excited that these findings put research a step closer to understanding the mechanisms that underlie human lysosomal storage diseases, said Palmieri. We hope that our research will help us design treatments to counteract this and other human diseases with a pathological storage component, such as Alzheimers, Huntingtons and Parkinsons diseases, and hopefully ameliorate the symptoms or reduce the progression of the disease for those affected.

The following researchers also contributed to this work: Rituraj Pal, Hemanth R. Nelvagal, Parisa Lotfi, Gary R. Stinnett, Michelle L. Seymour, Arindam Chaudhury, Lakshya Bajaj, Vitaliy V. Bondar, Laura Bremner, Usama Saleem, Dennis Y. Tse, Deepthi Sanagasetti, Samuel M. Wu, Joel R. Neilson, Fred A. Pereira, Robia G. Pautler, George G. Rodney and Jonathan D. Cooper.

This work was supported by NIH grant NS079618, grants from the Beyond Batten Disease Foundation, March of Dimes Foundation grant #5-FY12-114, and a Kings College London Graduate School International Studentship. This project was also supported in part by the Hamill Foundation and by IDDRC grant number 1U54 HD083092 from the Eunice Kennedy Shriver National Institute of Child Health and Human Development (Cores: Mouse Neurobehavior, RNA In Situ Hybridization, and Integrated Microscopy).

More information:

Visit here for more information about juvenile Batten disease.

Palmieri, M., et al., mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases, Nature Communications, February 2017, DOI: 10.1038/NCOMMS14338.

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Genetic study uncovers potential new treatments for inflammatory … – Science Daily

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Genetic study uncovers potential new treatments for inflammatory ...
Science Daily
Researchers have studied over ten million DNA variations and found new links between the human genome and inflammation tracers. The study uncovered new ...

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The Genetics Of Human Height Revealed – Science 2.0

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A large-scale international study involving 700,000 participants has revealed 83 genetic variations controlling human height.

It is well-known that above-average-height parents often have above-average-height children just as below-average-height parents often have below-average-height children. Indeed, this observation suggests that parent-to-child transmission of genetic information is the primary factor that determines an individual's height.

To discover the 83 genetic variations, the research team measured the presence of 250,000 genetic variations in the study's 700,000 participants - an enormous job.

"Of these 83 genetic variations, some influence adult height by more than 2 centimetres, which is enormous," said Guillaume Lettre, a professor at Universit de Montral's Faculty of Medicine. "The genes affected by these genetic variations modulate, among other things, bone and cartilage development and growth hormone production and activation."

Human height as a starting point for precision medicine

"In our study, we used adult height as a simple observable physical trait to understand how information in our DNA can explain how we are all different," said Lettre. "The idea was that if we could understand the genetics of human height, we could then apply this knowledge to develop genetic tools to predict other traits or the risk of developing common diseases."

Which people will have a heart attack before age 55 despite having a healthy lifestyle? Which children will develop leukemia, and how will they respond to treatment? Questions like these are at the heart of precision medicine, an emerging approach to healthcare that involves customizing treatment and prevention to the individual patient. The results of this study on human height could help to identify genetic variations that influence the risk of developing human diseases, the researchers believe. Eventually, these variations will be valuable tools for practioners of precision medicine to use.

The genetics of human height and of growth problems

In regards to height, the researchers found several genes that may represent good therapeutic targets for growth problems often observed in children. For example, they demonstrated that variations that inactivate the gene STC2 increase the height of individuals who carry them in their DNA by acting on certain growth factors. "In this sense, evaluating whether drugs that block STC2 activity could have an impact on growth seems to us very promising," concluded Lettre.

Citation: Joel N. Hirschhorn, Panos Deloukas, Guillaume Lettre, et al. "Rare and low-frequency coding variants alter human adult height", Nature, February 1st, 2017. DOI:10.1038/nature21039

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Human Genetics Market Is Expecting Worldwide Growth By 2024 … – Digital Journal

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"Human Genetics Market Research Report - Global Forecast to 2024"

Human genetic market, by instruments (Accessories, Device), by end-user (Hospital, Clinic, Research center), by method (Prenatal, Molecular, cytogenetic, presymptomatic), by application (Forensic science institute) - Global Forecast 2024

Key Players of Human Genetics Market:

Market Segmentation:

Major Human Genetics Market by Methods: Cytogenetic, Molecular, Presymptomatic and Prenatal.

Human Genetics Market by Product: Consumables, Devices and Accessories.

Human Genetics Market by Applications: Research, Diagnostic and Forensic Science and Others.

Human Genetics Market by End-Users: hospitals, clinics, research centers and forensic departments.

Request a Sample Copy @ https://www.marketresearchfuture.com/sample_request/714

Human Genetics Market Growth Influencer:

The growth driver includes advancement of genetics testing technologies, rising genetic diseases, and rising awareness in terms of increasing knowledge about the potential benefits in genetic testing. Furthermore, aging population and increasing incidence of cancer cases are the other factors propelling growth of human genetics market.

The market for screening the newborns, diagnosing rare and fatal disorders, and predicting the probability of occurrence of abnormalities & diseases are likely to expand. Particularly, genetic tests to screen the newborns are expected to expand immensely over the coming years. Furthermore, the genetic disorders caused by microorganisms such Zika virus is one of the major concern behind of microcephaly. Microcephaly is a birth defect that is associated with a small head and incomplete brain development in newborns that transferred from mother to her child. Such, diseases are expected raise the application of the human genetic studies there by driving by the market. However, the high costing instruments and lack of experienced professionals are the major restraints for the growth of Human genetics market.

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Human Genetics Market:

Genetics is the study of genes, their functions and their effects. Among the various types of genetics such as molecular genetics, developmental genetics, population genetics and quantitative genetics, human genetics is the study that deals with the inheritance occurs in human beings. It encompasses a variety of overlapping fields such as classical genetics, cytogenetic, molecular genetics, genomics and many more.

The study of human heredity occupies a central position in genetics. Much of this interest stems from a basic desire to know who humans are and why they are as they are. It can be useful as it can answer questions about human nature, understand the diseases and development of effective disease treatment, and understand genetics of human life. At a more practical level, an understanding of human heredity is of critical importance in the prediction, diagnosis, and treatment of diseases that have a genetic component.

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MRFR team have supreme objective to provide the optimum quality market research and intelligence services to our clients. Our market research studies by products, services, technologies, applications, end users, and market players for global, regional, and country level market segments, enable our clients to see more, know more, and do more, which help to answer all their most important questions.

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How To Plan The Trip Of A Lifetime With Your DNA – Forbes

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Forbes
How To Plan The Trip Of A Lifetime With Your DNA
Forbes
Fielding's quest to to connect clients with intimate, unforgettable experiences like these fueled the idea of a DNA-dictated itinerarya notion that was, fittingly, in her genes. Familiar with ancestral testing thanks to her family's background in ...

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APD releases new stats on cases impacted by DNA lab freezer break – KXAN.com

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KXAN.com
APD releases new stats on cases impacted by DNA lab freezer break
KXAN.com
The Austin Police DNA lab has been shut down since June, due to a lack of properly trained staff, but a memo obtained by KXAN shows problems with the lab also extend to equipment failure from March 2016. During that time, the maintenance manager ...

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Forensic DNA profiling might be about to take a big leap forward. Are we ready? – The Guardian

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Picture the scene. A detective is addressing her team:

The DNA test results are in. Were looking for a white male suspect, 3437 years old, born in the summer in a temperate climate. Hes used cocaine in the past. His mother smoked, but he doesnt. He drinks heavily, like his Dad. Were seeing high stress levels, and looking at the air pollution markers, lets start looking downtown, probably near a major intersection.

Science fiction? Yes, for now. But advances in epigenetics the study of reversible chemical modifications to chromosomes that play a role in determining which genes are activated in which cells might soon start making their way out of research labs and into criminal forensics facilities.

Take the idea of the epigenetic clock, one of the ways in which our cells and DNA can betray our age. Epigenetic patterns change throughout our lives, along broadly predictable paths, making it possible to infer age from DNA samples.

Steve Horvath at UCLA has developed a statistical model based on 350 potential epigenetic modification positions in the human genome that can estimate your age to within three and a half years. The rate of epigenetic aging seems to depend somewhat on race, and can be affected by some health conditions, but this kind of test is already at the stage when forensics labs are validating it for use in criminal investigations.

The things we get up to while our epigenetic clocks are ticking can also leave their mark on our DNA. Cigarette smoking correlates with characteristic and persistent epigenetic changes. The same goes for cocaine, opioids and other illicit substances. Theres also some evidence for epigenetic signatures of obesity, traumatic childhood experiences, exposure to tobacco in the womb, season of birth, exposure to environmental pollution, exercise, and possibly even the things our parents and grandparents did before we were born.

There are also ways to detect non-epigenetic evidence of environmental exposures that we all experience For example, international travel or exposure to certain chemicals or experiences can change the composition of the microbiome (the collection of bacteria, viruses and fungi found in and on our bodies). Tests based on these observations might also eventually find their way into forensic science.

Unless theres an urgent need to tell the difference between a pair of identical twins for example if one is suspected of murder none of these tests are likely to appear in court in the immediate future. There needs to be extensive validation before we know if these findings are specific and sensitive enough to be useful. Existing epigenetic analysis methods also use impracticably large samples of blood or tissue, much more than is usually available at a crime scene.

However, these technical challenges will hopefully soon be overcome, and its not too early to start thinking about the legal implications of this type of information. Do we want law enforcement agencies and governments to know the details of our personal and family histories, our vices and habits? Can epigenetic evidence be presented accurately by lawyers, and interpreted appropriately by jurors? Even intelligent people without statistical training can struggle with the concepts of, for example, probabilities in the context of DNA fingerprinting.

And if as a juror youre supposed to decide somebodys guilt or innocence based on evidence of the crime, what bias might be introduced by knowing their epigenetic history or that of the victim?

There are no easy answers, and there is the potential to do great harm if these shiny new technologies are applied inappropriately. Epigenetics is an exciting and fast-moving science; lets hope that the legal and ethical fields can keep up with it.

Cath Ennis book Introducing Epigenetics: A Graphic Guide (with Oliver Pugh) is out now in the UK, and can be pre-ordered for March release elsewhere

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Forensic DNA profiling might be about to take a big leap forward. Are we ready? - The Guardian

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