Falsey AR, Walsh EE. Respiratory syncytial virus infection in adults. Clin Microbiol Rev. 2000;13(3):37184.
Article CAS PubMed PubMed Central Google Scholar
Walker CLF, Rudan I, Liu L, Nair H, Theodoratou E, Bhutta ZA, OBrien KL, Campbell H, Black RE. Global burden of childhood pneumonia and diarrhoea. Lancet (London, England). 2013;381(9875):140516.
Article PubMed Google Scholar
Hirve S, Crawford N, Palekar R, Zhang W. Clinical characteristics, predictors, and performance of case definition-Interim results from the WHO global respiratory syncytial virus surveillance pilot. Influenza Other Respir Viruses. 2020;14(6):64757.
Article PubMed Google Scholar
Mazur NI, Higgins D, Nunes MC, Melero JA, Langedijk AC, Horsley N, Buchholz UJ, Openshaw PJ, McLellan JS, Englund JA, et al. The respiratory syncytial virus vaccine landscape: lessons from the graveyard and promising candidates. Lancet Infect Dis. 2018;18(10):e295311.
Article PubMed Google Scholar
Wang X, Li Y, Deloria-Knoll M, Madhi SA, Cohen C, Ali A, Basnet S, Bassat Q, Brooks WA, Chittaganpitch M, et al. Global burden of acute lower respiratory infection associated with human metapneumovirus in children under 5 years in 2018: a systematic review and modelling study. Lancet Glob Health. 2021;9(1):e3343.
Article CAS PubMed Google Scholar
Venkatesan P. First RSV vaccine approvals. Lancet Microbe. 2023;4(8):e577.
Article PubMed Google Scholar
Tabatabai J, Prifert C, Pfeil J, Grulich-Henn J, Schnitzler P. Novel respiratory syncytial virus (RSV) genotype ON1 predominates in Germany during winter season 201213. PLoS ONE. 2014;9(10):e109191.
Article PubMed PubMed Central Google Scholar
ICTV: The official website of the international committee on taxonomy of viruses (ICTV. 2022, Available online: https://talk.ictvonline.org/taxonomy/. Accessed 6 May 2022.
Mufson MA, Orvell C, Rafnar B, Norrby E. Two distinct subtypes of human respiratory syncytial virus. J Gen Virol. 1985;66(Pt 10):211124.
Article CAS PubMed Google Scholar
Zhao X, Wang C, Jiang H, Zhang H, Fang F, Chen M, Yuan Z, Teng Z, Liu J, Zhang X. Analysis of circulating respiratory syncytial virus A strains in Shanghai, China identified a new and increasingly prevalent lineage within the dominant ON1 genotype. Front Microbiol. 2022;13:966235.
Article PubMed PubMed Central Google Scholar
Agoti CN, Otieno JR, Munywoki PK, Mwihuri AG, Cane PA, Nokes DJ, Kellam P, Cotten M. Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing. J Virol. 2015;89(7):344454.
Article CAS PubMed PubMed Central Google Scholar
Peret TC, Hall CB, Hammond GW, Piedra PA, Storch GA, Sullender WM, Tsou C, Anderson LJ. Circulation patterns of group A and B human respiratory syncytial virus genotypes in 5 communities in North America. J Infect Dis. 2000;181(6):18916.
Article CAS PubMed Google Scholar
Peret TC, Hall CB, Schnabel KC, Golub JA, Anderson LJ. Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community. J Gen Virol. 1998;79(Pt 9):22219.
Article CAS PubMed Google Scholar
Pangesti KNA, Abd El Ghany M, Walsh MG, Kesson AM, Hill-Cawthorne GA. Molecular epidemiology of respiratory syncytial virus. Rev Med Virol. 2018;28(2):e1968.
Article Google Scholar
Eshaghi A, Duvvuri VR, Lai R, Nadarajah JT, Li A, Patel SN, Low DE, Gubbay JB. Genetic variability of human respiratory syncytial virus A strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication. PLoS ONE. 2012;7(3):e32807.
Article CAS PubMed PubMed Central Google Scholar
Chen G, Lan M, Lin S, Zhang Y, Zhang D, Weng Y, Zheng K. Genome analysis of human respiratory syncytial virus in Fujian Province, Southeast China. Infect Genet Evol J Mol Epidemiol Evol Genet Infect Dis. 2022;103:105329.
CAS Google Scholar
Duvvuri VR, Granados A, Rosenfeld P, Bahl J, Eshaghi A, Gubbay JB. Genetic diversity and evolutionary insights of respiratory syncytial virus A ON1 genotype: global and local transmission dynamics. Sci Rep. 2015;5:14268.
Article CAS PubMed PubMed Central Google Scholar
Fan R, Fan C, Zhang J, Wen B, Lei Y, Liu C, Chen L, Liu W, Wang C, Qu X. Respiratory syncytial virus subtype ON1/NA1/BA9 predominates in hospitalized children with lower respiratory tract infections. J Med Virol. 2017;89(2):21321.
Article CAS PubMed Google Scholar
Otieno JR, Kamau EM, Agoti CN, Lewa C, Otieno G, Bett A, Ngama M, Cane PA, Nokes DJ. Spread and evolution of respiratory syncytial virus a genotype ON1, coastal Kenya, 20102015. Emerg Infect Dis. 2017;23(2):26471.
Article PubMed PubMed Central Google Scholar
Zheng Y, Liu L, Wang S, Li Z, Hou M, Li J, Yu XF, Zhang W, Hua S. Prevailing genotype distribution and characteristics of human respiratory syncytial virus in northeastern China. J Med Virol. 2017;89(2):22233.
Article CAS PubMed Google Scholar
Trento A, Casas I, Caldern A, Garcia-Garcia ML, Calvo C, Perez-Brea P, Melero JA. Ten years of global evolution of the human respiratory syncytial virus BA genotype with a 60-nucleotide duplication in the G protein gene. J Virol. 2010;84(15):750012.
Article CAS PubMed PubMed Central Google Scholar
Trento A, Galiano M, Videla C, Carballal G, Garca-Barreno B, Melero JA, Palomo C. Major changes in the G protein of human respiratory syncytial virus isolates introduced by a duplication of 60 nucleotides. J Gen Virol. 2003;84(Pt 11):311520.
Article CAS PubMed Google Scholar
Baek YH, Choi EH, Song MS, Pascua PN, Kwon HI, Park SJ, Lee JH, Woo SI, Ahn BH, Han HS, et al. Prevalence and genetic characterization of respiratory syncytial virus (RSV) in hospitalized children in Korea. Arch Virol. 2012;157(6):103950.
Article CAS PubMed Google Scholar
Dapat IC, Shobugawa Y, Sano Y, Saito R, Sasaki A, Suzuki Y, Kumaki A, Zaraket H, Dapat C, Oguma T, et al. New genotypes within respiratory syncytial virus group B genotype BA in Niigata, Japan. J Clin Microbiol. 2010;48(9):34237.
Article CAS PubMed PubMed Central Google Scholar
Chen X, Zhu Y, Wang W, Li C, An S, Lu G, Jin R, Xu B, Zhou Y, Chen A, et al. A multi-center study on molecular epidemiology of human respiratory syncytial virus from children with acute lower respiratory tract infections in the mainland of China between 2015 and 2019. Virol Sin. 2021;36(6):147583.
Article CAS PubMed PubMed Central Google Scholar
Luo HJ, Huang XB, Zhong HL, Ye CX, Tan X, Zhou K, Yuan L, Zhang SF, Zhu X, Lin CJ, et al. Epidemiological characteristics and phylogenic analysis of human respiratory syncytial virus in patients with respiratory infections during 20112016 in southern China. Int J Infect Dis IJID Off Publ Int Soc Infect Dis. 2020;90:517.
CAS Google Scholar
Song J, Zhang Y, Wang H, Shi J, Sun L, Zhang X, Yang Z, Guan W, Zhang H, Yu P, et al. Emergence of ON1 genotype of human respiratory syncytial virus subgroup A in China between 2011 and 2015. Sci Rep. 2017;7(1):5501.
Article PubMed PubMed Central Google Scholar
Zou L, Yi L, Wu J, Song Y, Huang G, Zhang X, Liang L, Ni H, Pybus OG, Ke C, et al. Evolution and transmission of respiratory syncytial group A (RSV-A) viruses in Guangdong, China 20082015. Front Microbiol. 2016;7:1263.
Article PubMed PubMed Central Google Scholar
Zhang H, Zhu A, Gao GF, Li Z. Epidemiological and clinical characteristics of respiratory syncytial virus infections in children aged <5 years in China, from 20142018. Vaccines. 2022;10(5):810.
Article PubMed PubMed Central Google Scholar
Song J, Wang H, Shi J, Cui A, Huang Y, Sun L, Xiang X, Ma C, Yu P, Yang Z, et al. Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014. Sci Rep. 2017;7(1):16765.
Article PubMed PubMed Central Google Scholar
Wang X, Wang D, Umar S, Qin S, Ling Q, Gray GC, Liu Y. Molecular typing of human adenoviruses among hospitalized patients with respiratory tract infections in a tertiary Hospital in Guangzhou, China between 2017 and 2019. BMC Infect Dis. 2021;21(1):748.
Article CAS PubMed PubMed Central Google Scholar
Tamura K, Stecher G, Kumar S. MEGA11: molecular evolutionary genetics analysis version 11. Mol Biol Evol. 2021;38(7):30227.
Article CAS PubMed PubMed Central Google Scholar
Steentoft C, Vakhrushev SY, Joshi HJ, Kong Y, Vester-Christensen MB, Schjoldager KT, Lavrsen K, Dabelsteen S, Pedersen NB, Marcos-Silva L, et al. Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology. EMBO J. 2013;32(10):147888.
Article CAS PubMed PubMed Central Google Scholar
Gupta R JE, Brunak S. Prediction of N-glycosylation sites in human proteins. NetNGlycServer. 2004. Available: http://www.cbsdtudk/services/NetNGlyc/. Accessed 27 Jan 2023.
Jia R, Lu L, Su L, Lin Z, Gao D, Lv H, Xu M, Liu P, Cao L, Xu J. Resurgence of respiratory syncytial virus infection during COVID-19 pandemic among children in Shanghai, China. Front Microbiol. 2022;13:938372.
Article PubMed PubMed Central Google Scholar
Feng L, Li Z, Zhao S, Nair H, Lai S, Xu W, Li M, Wu J, Ren L, Liu W, et al. Viral etiologies of hospitalized acute lower respiratory infection patients in China, 20092013. PLoS ONE. 2014;9(6):e99419.
Article PubMed PubMed Central Google Scholar
Huang XB, Yuan L, Ye CX, Zhu X, Lin CJ, Zhang DM, He KS, Niu RX, Cao KY, Xu L. Epidemiological characteristics of respiratory viruses in patients with acute respiratory infections during 20092018 in southern China. Int J Infect Dis IJID Off Publ Int Soc Infect Dis. 2020;98:2132.
CAS Google Scholar
Liu WK, Chen DH, Tan WP, Qiu SY, Xu D, Zhang L, Gu SJ, Zhou R, Liu Q. Paramyxoviruses respiratory syncytial virus, parainfluenza virus, and human metapneumovirus infection in pediatric hospitalized patients and climate correlation in a subtropical region of southern China: a 7-year survey. Eur J Clin Microbiol Infect Dis Off Publ Eur Soc Clin Microbiol. 2019;38(12):235564.
Article CAS Google Scholar
Zhang Y, Qiao L, Yao J, Yu N, Mu X, Huang S, Hu B, Li W, Qiu F, Zeng F, et al. Epidemiological and clinical characteristics of respiratory viruses in 4403 pediatric patients from multiple hospitals in Guangdong, China. BMC Pediatr. 2021;21(1):284.
Article PubMed PubMed Central Google Scholar
Li W, Wang Y, Yu B, Tan Q, Zhou J, Hu J, Wu Y, Wang B, Li H. Disease severity of respiratory syncytial virus (RSV) infection correlate to a novel set of five amino acid substitutions in the RSV attachment glycoprotein (G) in China. Virus Res. 2020;281:197937.
Article CAS PubMed Google Scholar
Liao X, Hu Z, Liu W, Lu Y, Chen D, Chen M, Qiu S, Zeng Z, Tian X, Cui H, et al. New epidemiological and clinical signatures of 18 pathogens from respiratory tract infections based on a 5-year study. PLoS ONE. 2015;10(9):e0138684.
Article PubMed PubMed Central Google Scholar
Liu WK, Liu Q, Chen DH, Liang HX, Chen XK, Huang WB, Qin S, Yang ZF, Zhou R. Epidemiology and clinical presentation of the four human parainfluenza virus types. BMC Infect Dis. 2013;13:28.
Article PubMed PubMed Central Google Scholar
Harada Y, Kinoshita F, Yoshida LM, le Minh N, Suzuki M, Morimoto K, Toku Y, Tomimasu K, Moriuchi H, Ariyoshi K. Does respiratory virus coinfection increases the clinical severity of acute respiratory infection among children infected with respiratory syncytial virus? Pediatr Infect Dis J. 2013;32(5):4415.
Article PubMed Google Scholar
Mazur NI, Bont L, Cohen AL, Cohen C, von Gottberg A, Groome MJ, Hellferscee O, Klipstein-Grobusch K, Mekgoe O, Naby F, et al. Severity of respiratory syncytial virus lower respiratory tract infection with viral coinfection in HIV-uninfected children. Clin Infect Dis Off Publ Infect Dis Soc Am. 2017;64(4):44350.
Google Scholar
Elhakim M, Hafiz Rasooly M, Fahim M, Sheikh Ali S, Haddad N, Cherkaoui I, Hjaija D, Nadeem S, Assiri A, Aljifri A, et al. Epidemiology of severe cases of influenza and other acute respiratory infections in the Eastern Mediterranean Region, July 2016 to June 2018. J Infect Public Health. 2020;13(3):4239.
Article PubMed Google Scholar
Fullana Barcel MI, Asensio Rodriguez J, Artigues Serra F, Ferre Beltran A, Salva Dagosto P, Almodovar Garcia M, Lopez Bilbao MDC, Sanchis Corts P, Reina Prieto J, Riera Jaume M. Epidemiological and clinical characteristics of community-acquired and nosocomial influenza cases and risk factors associated with complications: a four season analysis of all adult patients admitted in a tertiary hospital. Influenza Other Respir viruses. 2021;15(3):35260.
Article PubMed Google Scholar
Tsukagoshi H, Yokoi H, Kobayashi M, Kushibuchi I, Okamoto-Nakagawa R, Yoshida A, Morita Y, Noda M, Yamamoto N, Sugai K, et al. Genetic analysis of attachment glycoprotein (G) gene in new genotype ON1 of human respiratory syncytial virus detected in Japan. Microbiol Immunol. 2013;57(9):6559.
Article CAS PubMed Google Scholar
Agoti CN, Otieno JR, Gitahi CW, Cane PA, Nokes DJ. Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya. Emerg Infect Dis. 2014;20(6):9509.
Article CAS PubMed PubMed Central Google Scholar
Kim YJ, Kim DW, Lee WJ, Yun MR, Lee HY, Lee HS, Jung HD, Kim K. Rapid replacement of human respiratory syncytial virus A with the ON1 genotype having 72 nucleotide duplication in G gene. Infect Genet Evol J Mol Epidemiol Evol Genet Infect Dis. 2014;26:10312.
CAS Google Scholar
Zhang Y, Xu W, Shen K, Xie Z, Sun L, Lu Q, Liu C, Liang G, Beeler JA, Anderson LJ. Genetic variability of group A and B human respiratory syncytial viruses isolated from 3 provinces in China. Arch Virol. 2007;152(8):142534.
Article CAS PubMed Google Scholar
Chirkova T, Boyoglu-Barnum S, Gaston KA, Malik FM, Trau SP, Oomens AG, Anderson LJ. Respiratory syncytial virus G protein CX3C motif impairs human airway epithelial and immune cell responses. J Virol. 2013;87(24):1346679.
Article CAS PubMed PubMed Central Google Scholar
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