(Image credit: Erik Jacobsen/Cover Lab)
PALO ALTO, Calif., July 24 (UPI) -- Researchers in California say they've made a breakthrough in computational biology by creating the first complete computer model of an organism.
Writing in the journal Cell, researchers at Stanford University combined date from more than 900 scientific papers to account for every molecular interaction in the life cycle of Mycoplasma genitalium, the world's smallest free-living bacterium.
Modeling the entirety of an organism in a computer has been a longstanding goal for computational biology and represents a stepping-stone toward the use of computer-aided design in bioengineering and medicine, a Stanford release reported.
Biology studies in the past two decades have produced enormous amounts of cellular information, so a lack of experimental data is no longer the primary limiting factor, researchers said; instead, it's how to make sense of what is already known.
A complete computer model of an organism can clarify and illuminate data sets whose sheer size would otherwise place them outside human understanding, they said.
"You don't really understand how something works until you can reproduce it yourself," Stanford bioengineering researcher Jayodita Sanghvi said.
Mycoplasma genitalium was chosen, the researchers said, because it possesses the smallest genome of any free-living organism -- only 525 genes -- as opposed to the 4,288 of E. coli, a more traditional laboratory bacterium.
See original here:
Computer model mimics entire organism
- Host change alters toxic cocktail [Last Updated On: March 19th, 2011] [Originally Added On: March 19th, 2011]
- Integrative Biology 131 - Lecture 01: Organization of Body [Last Updated On: August 27th, 2011] [Originally Added On: August 27th, 2011]
- Systems Biology Lecture 1 [Last Updated On: August 27th, 2011] [Originally Added On: August 27th, 2011]
- Biology 1B - Lecture 24: Phylogenetics [Last Updated On: August 28th, 2011] [Originally Added On: August 28th, 2011]
- Biology 1B - Lecture 28: Evolutionary Medicine - Published ! [Last Updated On: August 28th, 2011] [Originally Added On: August 28th, 2011]
- 1. Introduction to Human Behavioral Biology [Last Updated On: August 29th, 2011] [Originally Added On: August 29th, 2011]
- Bill Nye: 100 Greatest Discoveries : Biology (Discovery Channel) 3/3 [Last Updated On: August 31st, 2011] [Originally Added On: August 31st, 2011]
- Introduction to Biology - 1 - What is Biology? [Last Updated On: August 31st, 2011] [Originally Added On: August 31st, 2011]
- What is Biology? [Last Updated On: September 3rd, 2011] [Originally Added On: September 3rd, 2011]
- Biology 1B - Lecture 16: Population Genetics I: Mendel, Darw [Last Updated On: September 3rd, 2011] [Originally Added On: September 3rd, 2011]
- Bill Nye: 100 Greatest Discoveries : Biology (Discovery Channel) 2/3 [Last Updated On: September 4th, 2011] [Originally Added On: September 4th, 2011]
- Biology 1B - Lecture 3 [Last Updated On: September 6th, 2011] [Originally Added On: September 6th, 2011]
- Biology: Proteins: Amino Acids [Last Updated On: September 8th, 2011] [Originally Added On: September 8th, 2011]
- Girls Aloud - Biology [Last Updated On: September 9th, 2011] [Originally Added On: September 9th, 2011]
- Biology 1A - Lecture 3: Cell structure and organization -#1 [Last Updated On: September 10th, 2011] [Originally Added On: September 10th, 2011]
- Biology 1A - Lecture 2 [Last Updated On: September 11th, 2011] [Originally Added On: September 11th, 2011]
- Biology of Alzheimer's Disease and Other Dementias [Last Updated On: September 11th, 2011] [Originally Added On: September 11th, 2011]
- Bill Nye: 100 Greatest Discoveries : Biology (Discovery Channel) 1/3 [Last Updated On: September 11th, 2011] [Originally Added On: September 11th, 2011]
- What is Biology - Part 1: Lecture 1.1 [Last Updated On: September 12th, 2011] [Originally Added On: September 12th, 2011]
- Lec 1 | MIT 7.012 Introduction to Biology, Fall 2004 [Last Updated On: September 15th, 2011] [Originally Added On: September 15th, 2011]
- (Notes On) Biology [Last Updated On: September 17th, 2011] [Originally Added On: September 17th, 2011]
- Biology Introduction [Last Updated On: September 18th, 2011] [Originally Added On: September 18th, 2011]
- Biology 1B - Lecture 10: Paleoecology and Hominid Ecology [Last Updated On: September 20th, 2011] [Originally Added On: September 20th, 2011]
- Zen Biology Lesson for Enlightenment [Last Updated On: September 20th, 2011] [Originally Added On: September 20th, 2011]
- Biology: Mitosis: An Overview [Last Updated On: September 23rd, 2011] [Originally Added On: September 23rd, 2011]
- Synthetic Biology: Drew Endy [Last Updated On: September 24th, 2011] [Originally Added On: September 24th, 2011]
- ATP: Adenosine Triphosphate [Last Updated On: September 26th, 2011] [Originally Added On: September 26th, 2011]
- Biology 1B - Lecture 13: Conclusion [Last Updated On: September 27th, 2011] [Originally Added On: September 27th, 2011]
- Biology 1AL - Lecture 1 [Last Updated On: September 30th, 2011] [Originally Added On: September 30th, 2011]
- Biology 1A - Lecture 7: Cell membrane structure and transpor [Last Updated On: October 1st, 2011] [Originally Added On: October 1st, 2011]
- Biology 1AL - Lecture 4: Lab 5: Complementation I, Genetics [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Pilobolus: A performance merging dance and biology [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Molecular Biology's Central Dogma [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Biology 1A - Lecture 15: The Laws that Govern the Inheritanc [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Biology 1B - Lecture 1: Introduction to Ecology [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Girls Aloud - Biology Live At Wembley [Last Updated On: October 4th, 2011] [Originally Added On: October 4th, 2011]
- Lec 1 | MIT 7.014 Introductory Biology, Spring 2005 [Last Updated On: October 7th, 2011] [Originally Added On: October 7th, 2011]
- The New Biology - From Victim to Master of Your Health [Last Updated On: October 7th, 2011] [Originally Added On: October 7th, 2011]
- Synthetic Biology Explained [Last Updated On: October 7th, 2011] [Originally Added On: October 7th, 2011]
- Andrew Hessel - Introduction to Synthetic Biology [Last Updated On: October 7th, 2011] [Originally Added On: October 7th, 2011]
- Foldit: Biology for gamers - by Nature Video [Last Updated On: October 7th, 2011] [Originally Added On: October 7th, 2011]
- Bruce Lipton - Biology of Perception 1 of 7 [Last Updated On: October 12th, 2011] [Originally Added On: October 12th, 2011]
- Biology 1B - Lecture 15: Darwin and the Origin II [Last Updated On: October 12th, 2011] [Originally Added On: October 12th, 2011]
- Girls Aloud - Biology - Video [Last Updated On: October 13th, 2011] [Originally Added On: October 13th, 2011]
- Biology 1A - Lecture 14: How Somatic Cells - Mitosis - and G - Video [Last Updated On: October 13th, 2011] [Originally Added On: October 13th, 2011]
- Dna Molecular Biology Visualizations - Wrapping And Replicat - Video [Last Updated On: October 13th, 2011] [Originally Added On: October 13th, 2011]
- The Biology Song - Video [Last Updated On: October 14th, 2011] [Originally Added On: October 14th, 2011]
- What is Biology? - Video [Last Updated On: October 14th, 2011] [Originally Added On: October 14th, 2011]
- Lec 2 | MIT 7.014 Introductory Biology, Spring 2005 - Video [Last Updated On: October 14th, 2011] [Originally Added On: October 14th, 2011]
- Biology 1A - Lecture 19: Gene Expression II - RNA is transla - Video [Last Updated On: October 15th, 2011] [Originally Added On: October 15th, 2011]
- Biology 1B - Lecture 14: Darwin and the Origin of Species I - Video [Last Updated On: October 15th, 2011] [Originally Added On: October 15th, 2011]
- Biology 1A - Lecture 1 - Video [Last Updated On: October 15th, 2011] [Originally Added On: October 15th, 2011]
- Integrative Biology 131 - Lecture 18: Lymphatic System - Video [Last Updated On: October 20th, 2011] [Originally Added On: October 20th, 2011]
- biology - nuclear transfer (clone creating) - Video [Last Updated On: October 20th, 2011] [Originally Added On: October 20th, 2011]
- Introduction to Biology - Video [Last Updated On: October 20th, 2011] [Originally Added On: October 20th, 2011]
- Biology 1A - Lecture 1: Course introduction. Introduction to macromolecules. - Video [Last Updated On: October 23rd, 2011] [Originally Added On: October 23rd, 2011]
- Bruce Lipton - Biology of Perception 2 of 7 - Video [Last Updated On: October 23rd, 2011] [Originally Added On: October 23rd, 2011]
- Seinfeld - Marine Biologist - Video [Last Updated On: October 27th, 2011] [Originally Added On: October 27th, 2011]
- Biological Classification: Kingdoms - Video [Last Updated On: October 28th, 2011] [Originally Added On: October 28th, 2011]
- A Biologist's St. Patrick's Day Song - Video [Last Updated On: October 28th, 2011] [Originally Added On: October 28th, 2011]
- A Biologist's Mother's Day Song - Video [Last Updated On: October 30th, 2011] [Originally Added On: October 30th, 2011]
- Biology 1B - Lecture 28: Fungal diversity and reproduction - Video [Last Updated On: November 2nd, 2011] [Originally Added On: November 2nd, 2011]
- Learn Biology: Ecosystem Definition [Last Updated On: November 5th, 2011] [Originally Added On: November 5th, 2011]
- Learn Biology: Gregor Mendel Biography - Video [Last Updated On: November 6th, 2011] [Originally Added On: November 6th, 2011]
- TEDxCaltech - J. Craig Venter - Future Biology - Video [Last Updated On: November 8th, 2011] [Originally Added On: November 8th, 2011]
- Biology 1B - Lecture 31: Origin of land plants - bryophytes - Video [Last Updated On: November 8th, 2011] [Originally Added On: November 8th, 2011]
- Practical biology - The Thin Blue Line - Video [Last Updated On: November 8th, 2011] [Originally Added On: November 8th, 2011]
- Dr. Karin Remington on Computational Biology - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Bully-Soundtrack Biology Class - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- From Chemtrails to Pseudo-Life- The Dark Agenda of Synthetic Biology. SLIDE SHOW - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- ROUTINE OF EXERCISES TO LOSE WEIGHT WITH THE BIOLOGICAL AND DOMESTIC GYMNASTICS OF LUIS MORI - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Biology 1B - Lecture 7: Trophic Dynamics and Biogeography - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Plant Tissue Arrangement in Organs (AP Biology) - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- BIOLOGICAL GYMNASTICS OF WEIGHT'S REDUCTION BY LUIS MORI-YEAR 2012 - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- From Chemtrails to Pseudo-Life: The Dark Agenda of Synthetic Biology (FULL LENGTH VIDEO) - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Pre-AP Biology - Unit 5.12 - Translation.mp4 - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Marine Biology Research @ Clark U - Video [Last Updated On: November 14th, 2011] [Originally Added On: November 14th, 2011]
- Major in a Minute: Biology - Video [Last Updated On: November 17th, 2011] [Originally Added On: November 17th, 2011]
- Bruce Lipton - Biology of Perception 3 of 7 - Video [Last Updated On: November 17th, 2011] [Originally Added On: November 17th, 2011]
- Biology: Carbohydrates: Monosaccharides - Video [Last Updated On: November 17th, 2011] [Originally Added On: November 17th, 2011]